Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr5647g00001 ATGTTGGTCGCGTTGCGCAACGGAATTACGGGAATGGCAAAAGTGAAAATAGTGTGCAAGTGCAGGGTATTTTGTGAAACAGAGATGGACAAAAACGAAAGAAGATTAGGAGCCTTTAGTTTGGCGCTTTCTACGCCCATCGGTGAACCCAATGCCATTGAGCCTTCAATCATTCTTCACTCGTTTCGTTTCGTTTCGTTTCAGTCAAACCCTTCTCTCTCTTCAAATTCAATTTGCTATTCCAATTCCTCGGGAGTTGGTTCCATTCTCCGACGAACCATCTCAATTCCACGAAATCATTTAACTGTAACTGTACGAATGCGAATATTCATGGGGATTTGCTTTAGCATTGAAGAAGAAAACCGCCTCTCCGTCACCGATTCGAACGCGAAGCCTAAACTTCCAGCGTATGAAGCAGGATCGACACGTCATGAATCTGTTCCATTGGTTTCCGGTTCCATGAATATCAAAGATCTCCGCAAAAGCGCTGGATACAGCAATGTAGATATTTTCTCGTACGAGGAGCTGAGGCTCGCGACGAAGCACTTTCGTCCCGATTTCATTTTGGGAGAAGGAGGCTTTGGAGTTGTATATAAAGGAGTCATAGACGATTCTGTGAGGCCAGGTTACAATGCCACTGACGTCGCCATTAAGGAGCTTAATCGCGAAGGATTTCAAGGCGATAGGGAATGGCTCGTGCGTTTCTATGCACCAACCAAGGCAGAAGTTAACTATTTAGGTCAATTCAGTCACTCCAATCTGGTGAAGCTCATTGGATATTGCTGTGAGGACGAACACCGGTTATTGGTCTATGAATACATGGCAAGTGGGAGCTTGGAGAAACATCTTTTTCGCAGAGTGGGCTCAACGTTGACTTGGTCAAGAAGAATGAAGATTGCTTTAAATGCTGCAAGAGGGCTTGCTTTTCTTCATGATGCAGAAAGGCCTATCATATATCGTGACTTCAAGACTTCAAATATCTTGCTAGATGCGGATTTCAATGCGAAACTTTCAGACTTTGGCCTTGCAAAGGATGGGCCGATGGGGGACCAAACCCATGTTTCAACACGAGTAATGGGCACATATGGATATGCTGCTCCTGAGTATGTCATGACTGGACATTTGACAGCTCGAAGTGATGTGTATGGTTTTGGGGTGGTGCTACTTGAACTGCTTATTGGTAGGAGAGCATTAGACAAGAGCAGGCCCAGCCGAGAGCACAATTTGGTTGAGTGGGCCCGCCCGCTGTTGAATCATAATAAAAAACTTTTGAAAATTTTAGACCCAAAACTAGACGGACAATATTCAAATAAAACTGCATTAAAGGTGGCCCATTTAGCATACCAATGTCTTAGCCAAAACCCCAAAGGCAGACCCCTAATGAGCCACGTTGTCGAAATTCTCGAAAACTTTCAGTCAAAGGGGGAAAATGAAGAAGAAGAAGATCAAATGCTTCAAACTGGTGGTGGCAGTGTAACCCTTTATGAGGTTCCAAAGGCCAGCGATGACAGTCCAACTTAG 1521 0.4458 MLVALRNGITGMAKVKIVCKCRVFCETEMDKNERRLGAFSLALSTPIGEPNAIEPSIILHSFRFVSFQSNPSLSSNSICYSNSSGVGSILRRTISIPRNHLTVTVRMRIFMGICFSIEEENRLSVTDSNAKPKLPAYEAGSTRHESVPLVSGSMNIKDLRKSAGYSNVDIFSYEELRLATKHFRPDFILGEGGFGVVYKGVIDDSVRPGYNATDVAIKELNREGFQGDREWLVRFYAPTKAEVNYLGQFSHSNLVKLIGYCCEDEHRLLVYEYMASGSLEKHLFRRVGSTLTWSRRMKIALNAARGLAFLHDAERPIIYRDFKTSNILLDADFNAKLSDFGLAKDGPMGDQTHVSTRVMGTYGYAAPEYVMTGHLTARSDVYGFGVVLLELLIGRRALDKSRPSREHNLVEWARPLLNHNKKLLKILDPKLDGQYSNKTALKVAHLAYQCLSQNPKGRPLMSHVVEILENFQSKGENEEEEDQMLQTGGGSVTLYEVPKASDDSPT 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr5647g00001 506 Gene3D Phosphorylase Kinase; domain 1 157 273 - -
Mupr5647g00001 506 SUPERFAMILY Protein kinase-like (PK-like) 164 469 IPR011009 -
Mupr5647g00001 506 CDD STKc_IRAK 189 471 - -
Mupr5647g00001 506 ProSitePatterns Protein kinases ATP-binding region signature. 189 218 IPR017441 GO:0005524
Mupr5647g00001 506 PANTHER OS01G0588500 PROTEIN-RELATED 133 472 - -
Mupr5647g00001 506 ProSitePatterns Serine/Threonine protein kinases active-site signature. 317 329 IPR008271 GO:0004672|GO:0006468
Mupr5647g00001 506 Gene3D Transferase(Phosphotransferase) domain 1 274 491 - -
Mupr5647g00001 506 FunFam Probable serine/threonine-protein kinase PBL8 274 487 - -
Mupr5647g00001 506 Pfam Protein kinase domain 188 466 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr5647g00001 506 ProSiteProfiles Protein kinase domain profile. 183 471 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr5647g00001 506 FunFam Serine/threonine-protein kinase BIK1 150 273 - -
Mupr5647g00001 506 MobiDBLite consensus disorder prediction 474 506 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr5647g00001 Mupr-Chr5647 20469 26522 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr5647g00001 171 468 Glycoside Hydrolase AT3G07070 51.495 5.18e-99 303
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Mupr5647g00001 PK_Tyr_Ser-Thr 2.5e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr5647g00001 - - gmx:100800465 664.07