Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr5646g00005 ATGGCTTTGAACCCAAGTTTCATTGAAAAATCTCAAATTTTCTTCCGTTTAGTTTTTGTTGGGTGTGGACTTACTAATTTAACTTGCTTTTCTCTACATGTTTTCTGTGTTGTGGTGTTGTTGATTAATAGATATTTGTCTAGCAGTATAATGGGTGAACAATTGAGGCTACTAAAAGTCATTGTTGTGCAAGGGAAGAGATTAGTGATCCGGGATTTCAGGAGCAGTGACCCTTATGTTGTTGTCAAGCTGGGGAATCAGACAGCAAAGACCAGGGTCATTAATTGTTGCTTGAATCCTGTTTGGAATGAAGAGCTGAGTTTCACTCTGACAGAACCTTTGCGAGTTCTAAATTTGGAAGTATTTGATAAAGATCTTTTGAAGGCTGATGACAAGATGGGAAATACATACCTCAACCTTCAACCATTACTCTCAGCAGGAAGATTAAAAGATATTTTAAAGGTCTCCTCTGGTGAGACAACATTAAGGAAGGTGAAACCGGATAGTGAAAATTGTCTTGTCCGTGAAAGCAGTATTAATTGTGTGAATGGCGAAGTGGTACAAAATGTTTGGTTGAGGCTTCGTGGAGTTGACTCTGGGGAGCTACAATTGACGATCAAGTTAATCACTTCTGCTGCTTCCTCAATATAG 651 0.3886 MALNPSFIEKSQIFFRLVFVGCGLTNLTCFSLHVFCVVVLLINRYLSSSIMGEQLRLLKVIVVQGKRLVIRDFRSSDPYVVVKLGNQTAKTRVINCCLNPVWNEELSFTLTEPLRVLNLEVFDKDLLKADDKMGNTYLNLQPLLSAGRLKDILKVSSGETTLRKVKPDSENCLVRESSINCVNGEVVQNVWLRLRGVDSGELQLTIKLITSAASSI 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr5646g00005 216 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 4 54 210 IPR044562 -
Mupr5646g00005 216 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 55 209 IPR035892 -
Mupr5646g00005 216 CDD C2_ArfGAP 57 200 - -
Mupr5646g00005 216 Pfam C2 domain 58 148 IPR000008 -
Mupr5646g00005 216 Gene3D C2 domain 55 215 IPR035892 -
Mupr5646g00005 216 ProSiteProfiles C2 domain profile. 38 153 IPR000008 -
Mupr5646g00005 216 PRINTS C2 domain signature 117 125 IPR000008 -
Mupr5646g00005 216 PRINTS C2 domain signature 96 109 IPR000008 -
Mupr5646g00005 216 PRINTS C2 domain signature 72 84 IPR000008 -
Mupr5646g00005 216 SMART C2_3c 57 152 IPR000008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr5646g00005 Mupr-Chr5646 19670 20845 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr5646g00005 51 209 C2H2 Transcription Factor Family AT4G05330 41.875 5.90e-32 117