Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr5642g00002 ATGTCAGCTCCTAGTCATGCAATTGCAGAGGCTGTGGCTGCCACAGCTGGGGCTATGTTACTTATTTCTGCAGTTTTCGTTTACTTCTTTCACAGATTTGTTCTTGCTCGATACCACCAGAGACACAAAGTTGGAGCAAGTTTGCTTCGAGAATCAGGAGTGAACCTTGAGTATATAAACAAAGTTGGTGGCAATGTGAAGGGATTAATTGTTGAAGAAAATGGGGTTGATGTTCTTTATGTGATGGACACAGAAAGAAGACCACTGATAACTGGATTCCCTAATAGTATATTCAATCCAAGTTATGAAGATGGTGAAGAGGAAAAGAGAATAGATATAATGGTCCAAAGGTCCAAAGAATCCAAGCCTCAGATTCCACTGGCATGTGAATCTCCAAGCTTGGTTGGTCATGAGAATCAAGTTAAGCCACAATCACAAATATCATCAGTTTCAACATCACTAACACCAAGACAAAACTTGCCACAATCACCTCAAGTAGCACCTCCACTTCAACCACTACCACAATCTTCACCAATGATTCTTGAAAAAAACAAAACTCAACCACCACCTCCTCCTCCAACAACACCACCACCACCACCACCTCCTCCTCCTCCTCCAACTCGTCCTCCACCACCACCACCTGGTCCACCTCCACTTCCAAAGGCCAGTGGCTTCATTTCATCACTGAAACCCCCACCTGTTCCTAAAGGGAAAACAAACATAAAAAACACCAAAGAGGGTATGGTAGGGGAGAGTTCAAGAGAGAAGGGTGTTGGTCAAACAAGGCTGAAGCCTCTACACTGGGATAAGGTTGCAGCAAATGTTGATCATTCAACAGTGTGGGATCATATCAATGATGGTTCTTTCCGGTTTGATGATGGACTAATGGAAACACTCTTTGGATATTCAAGCAGCTACATAACCCAAGAAAGAAACAGAACTCTTTCCACTTTGGCTAAGTCCAATTCCAATGGACCAACTCAAATATTCATTCTTGAGCCAAGAAAATCTCAAAACACTGCAATTGTTGTAAGATCACTTGCCATTTCTCGCAAGGGAATCTTGGATGCACTTCTTGATGGTCAGGGACTGAGTGTTGAGACACTTGAAAGACTCACTAAAATAGCTCCCACCCAAGAAGAGGAAGCCAAAATCATCCAATTTAGTGGAAACCCGGATCAGCTTGCTGATGCTGAGTCTTTCCTACACTACATTCTTAAAGCAGTTCCAACAGCATTCAACCGTTTGAAAGCAATGCTTTTCAGGTCGAGTTATGACTGTGAAGTTCTTCAGCTCAAGGAGCAGCTACAGACACTTGAGAGGGGTTGCAAGGAACTGAGAACTAGTGGTCTTTTTTTGAAACTCCTTGAGGCCATTCTCAAAGCTGGGAACCGGATGAATGCTGGAACTTCAAGAGGCAATGCACAAGGTTTCAACCTGAGTGCTCTTAGAAAACTTTCTGATGTGAAAAGTACAGATGGGAAGACTAGTTTGCTTCACTTTATAGTGGAACAAGTGGTTCAGTCAGAAGGAAAACGACAAGCTATGTATAAAAAAAAGCACAACCTTCACAATGGTGAAACAAGCAATGTGAATAGACCTTATTCATATAACATGATACAACAAGAGGCAGATAAAGAATATGCAATGCTTGGTTTGCAAGTGTTAGGTGGGCTAAGAGATGAGTTATGTGAAGCAAAGAAAGCAGCTAGCATTGAGTACCACAATTTCATCACCATGTGTTCCACTCTCAATGCTCATGTTAGTGAAATTAGACAGATTATAACATGCTGTGGCAACACTAGGAGTGGTGGATTTATCAAAGAAATGAAAGGGTTCCTAGAGGAATGTGAGGGAGAACTTGAGGTTGTGAAAGAGGAGCAAATTAGGATCATGGAGCTTGTGAAGAAAACGAACGAGTACTACCTAGCAGGAGCATCCAAAGACCATATGGCAAACCCCTTTCAACTTTTTGTTATTGTTAAAAGTTTTGTTGACATGGTAGATCAGGCTTGCATAGAACTAAAAAGGAAGGTAGAAAAGAAGAATGTGGGAGTAGAGGCTGCGTCAACGCCACCTTTGTCACCATCAAAGAGGACGCCACTCAGATTCCCTAACTTTGATTTGTATTTTCTGTCAAATGTGTCAGAAACTACATCTTCTAGCCAATCAGAAGATGATTTCTGA 2187 0.4193 MSAPSHAIAEAVAATAGAMLLISAVFVYFFHRFVLARYHQRHKVGASLLRESGVNLEYINKVGGNVKGLIVEENGVDVLYVMDTERRPLITGFPNSIFNPSYEDGEEEKRIDIMVQRSKESKPQIPLACESPSLVGHENQVKPQSQISSVSTSLTPRQNLPQSPQVAPPLQPLPQSSPMILEKNKTQPPPPPPTTPPPPPPPPPPPTRPPPPPPGPPPLPKASGFISSLKPPPVPKGKTNIKNTKEGMVGESSREKGVGQTRLKPLHWDKVAANVDHSTVWDHINDGSFRFDDGLMETLFGYSSSYITQERNRTLSTLAKSNSNGPTQIFILEPRKSQNTAIVVRSLAISRKGILDALLDGQGLSVETLERLTKIAPTQEEEAKIIQFSGNPDQLADAESFLHYILKAVPTAFNRLKAMLFRSSYDCEVLQLKEQLQTLERGCKELRTSGLFLKLLEAILKAGNRMNAGTSRGNAQGFNLSALRKLSDVKSTDGKTSLLHFIVEQVVQSEGKRQAMYKKKHNLHNGETSNVNRPYSYNMIQQEADKEYAMLGLQVLGGLRDELCEAKKAASIEYHNFITMCSTLNAHVSEIRQIITCCGNTRSGGFIKEMKGFLEECEGELEVVKEEQIRIMELVKKTNEYYLAGASKDHMANPFQLFVIVKSFVDMVDQACIELKRKVEKKNVGVEAASTPPLSPSKRTPLRFPNFDLYFLSNVSETTSSSQSEDDF 728
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr5642g00002 728 ProSiteProfiles Formin homology-2 (FH2) domain profile. 253 694 IPR015425 -
Mupr5642g00002 728 MobiDBLite consensus disorder prediction 131 261 - -
Mupr5642g00002 728 MobiDBLite consensus disorder prediction 184 221 - -
Mupr5642g00002 728 MobiDBLite consensus disorder prediction 137 161 - -
Mupr5642g00002 728 Coils Coil 429 449 - -
Mupr5642g00002 728 Pfam Formin Homology 2 Domain 260 668 IPR015425 -
Mupr5642g00002 728 PANTHER FORMIN-RELATED 5 708 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Mupr5642g00002 728 SMART it6_source 255 683 IPR015425 -
Mupr5642g00002 728 SUPERFAMILY Formin homology 2 domain (FH2 domain) 196 682 - -
Mupr5642g00002 728 Gene3D Formin, FH2 domain 274 690 IPR042201 -
Mupr5642g00002 728 Coils Coil 607 627 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr5642g00002 Mupr-Chr5642 11618 14189 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr5642g00002 8 726 FH2 protein (formin) Gene Family AT1G70140 40.562 7.41e-155 466
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr5642g00002 - - gsj:114409782 1164.83