Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr5642g00001 ATGGCTGCCGCCGGCGATGTTTTCAGGCAGGCTTTGCCGGAAGTGGGTGCCGCGAAGCTGCACGTGCTTGCCGTTGATGATAGCCACGTCGACCGCAAGGTCATTGAACGGTTGCTCAAAATCTCGTCTTGCAAAGTGACGGTTGTGGAAAGTGGAAGCAGGGCTCTACAGTATCTAGGGTTGGATGGAGACAAGAGTTCCATCGGTCTTGATGGTGTGAAGGTTAATTTGATAATGACGGACTATTCCATGCCGGGGATGACGGGATACGAATTGCTCAAGAAGATAAAGGAGTCGTCTGTTTTTAGAGAGGTTCCGGTGGTGGTTATGTCGTCTGAGAATATCTTGACACGAATTGATAGTTGCTTGGAAGAGGGAGCAGAAGAGTTTCTGTTGAAACCTGTAAAGTTGTCAGATGTAAAACGAGTAACAGATTTCATAATGAGAGGTGAAGGGAAGAACGGAGTAAAAAGATCTAAAAAAAGAAGCAGATCAGATGATTGCACTGCATCTCTATCAACTGCATTTTCATCAGTTTCTCATCCATGCGATCTATCATCAATTCCATCTCCGTCTGTAGCATACTCGAAGAAATCTAGATCGAGCATAGATTGA 615 0.4537 MAAAGDVFRQALPEVGAAKLHVLAVDDSHVDRKVIERLLKISSCKVTVVESGSRALQYLGLDGDKSSIGLDGVKVNLIMTDYSMPGMTGYELLKKIKESSVFREVPVVVMSSENILTRIDSCLEEGAEEFLLKPVKLSDVKRVTDFIMRGEGKNGVKRSKKRSRSDDCTASLSTAFSSVSHPCDLSSIPSPSVAYSKKSRSSID 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr5642g00001 204 PANTHER TWO-COMPONENT RESPONSE REGULATOR 20 162 IPR045279 GO:0009736
Mupr5642g00001 204 SMART REC_2 20 144 IPR001789 GO:0000160
Mupr5642g00001 204 Pfam Response regulator receiver domain 22 141 IPR001789 GO:0000160
Mupr5642g00001 204 CDD REC_typeA_ARR 22 143 - -
Mupr5642g00001 204 MobiDBLite consensus disorder prediction 179 204 - -
Mupr5642g00001 204 ProSiteProfiles Response regulatory domain profile. 21 148 IPR001789 GO:0000160
Mupr5642g00001 204 Gene3D - 19 182 - -
Mupr5642g00001 204 SUPERFAMILY CheY-like 19 148 IPR011006 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr5642g00001 Mupr-Chr5642 5236 7155 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr5642g00001 20 162 Response Regulator Gene Family AT5G62920 76.224 3.73e-75 223
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Mupr5642g00001 Response_reg 1.3e-20 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr5642g00001 K14492 - gmx:100306152 350.132