Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr5629g00002 ATGGTGCATTCAAAGAAGTTCAGAGGTGTCAGGCAGCGCCATTGGGGTTCATGGGTATCTGAAATTCGCCACCCACTTCTGAAGAGAAGGGTGTGGCTAGGGACATTTGAAACTGCAGAAGAAGCGGCTAGAGCCTATGATCAAGCTGCAATTCTGATGAGTGGAAGAAATGCGAAAACGAATTTCCCAATAACCCAAACTCCAGAAGGTGACCCGAAGAGCACAACGAGCGAGGACAGCCCCTCCACCTCCAAGGATCTGGAGGAAATCCTGCATGCTAAGCTTCGAAAATGTGGCAAGGTACCCTCTCCTTCGATGACCTGTTTGAGGCTTGACACTGAAAACTCCCACATCGGAGTGTGGCAAAAGCGTGCTGGGAGGCGCTCTGATTCAAATTGGGTCATGACGGTTCAACTGGGAAAGAAGAGTGGCAGCGAGACTCATCAAGCTGATAGTAGCACTAGCAGTACTAGTTCTCTTTCTCTACCTTCTTCCCATCATCGCCATGATTCACCATCCACTGTGACAGGTCATCAGGAAGTAATGAGGGGAGAGATTGATGAAGAGGAGAGAATCGCCCTTCAGATGATTGAGGAACTCCTCAACGACAGGAACTGCCCTAGCCCCTCTTTTAACAACATTCAAGAAAGGAATGCTCATGACCATGACCATAACCCCTTTCTCCTTTAA 690 0.487 MVHSKKFRGVRQRHWGSWVSEIRHPLLKRRVWLGTFETAEEAARAYDQAAILMSGRNAKTNFPITQTPEGDPKSTTSEDSPSTSKDLEEILHAKLRKCGKVPSPSMTCLRLDTENSHIGVWQKRAGRRSDSNWVMTVQLGKKSGSETHQADSSTSSTSSLSLPSSHHRHDSPSTVTGHQEVMRGEIDEEERIALQMIEELLNDRNCPSPSFNNIQERNAHDHDHNPFLL 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr5629g00002 229 FunFam Ethylene-responsive transcription factor 2 5 64 - -
Mupr5629g00002 229 CDD AP2 5 65 IPR001471 GO:0003700|GO:0006355
Mupr5629g00002 229 Gene3D AP2/ERF domain 5 65 IPR036955 GO:0003700|GO:0006355
Mupr5629g00002 229 SMART rav1_2 6 69 IPR001471 GO:0003700|GO:0006355
Mupr5629g00002 229 MobiDBLite consensus disorder prediction 141 182 - -
Mupr5629g00002 229 MobiDBLite consensus disorder prediction 60 85 - -
Mupr5629g00002 229 Pfam AP2 domain 6 54 IPR001471 GO:0003700|GO:0006355
Mupr5629g00002 229 MobiDBLite consensus disorder prediction 208 229 - -
Mupr5629g00002 229 SUPERFAMILY DNA-binding domain 6 64 IPR016177 GO:0003677
Mupr5629g00002 229 MobiDBLite consensus disorder prediction 60 81 - -
Mupr5629g00002 229 ProSiteProfiles AP2/ERF domain profile. 6 63 IPR001471 GO:0003700|GO:0006355
Mupr5629g00002 229 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 4 168 - -
Mupr5629g00002 229 PRINTS Ethylene responsive element binding protein signature 7 18 IPR001471 GO:0003700|GO:0006355
Mupr5629g00002 229 PRINTS Ethylene responsive element binding protein signature 29 45 IPR001471 GO:0003700|GO:0006355
Mupr5629g00002 229 MobiDBLite consensus disorder prediction 141 178 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr5629g00002 Mupr-Chr5629 24181 24964 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr5629g00002 1 202 AP2-EREBP Transcription Factor Family AT1G15360 60.766 1.69e-77 230
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Mupr5629g00002 AP2 9.4e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr5629g00002 - - gmx:100814893 377.867