LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mupr5623g00005	ATGGCCTTGAGGCCTTCATCTTTGGTGGTCCTACTGGCATATGGTGCGTTGATAATTCTCTTCTTTTTGACGCCATGCTGGTATGTCCTGGTCATACGAATGGAGAAACGTGTGAATTTGAACTCAAAAAACATTGTGTCCCAATTGCAATCGGAAATTGAGCACTCGGCTGAACTGTTACACCCTATGAAATCATCATCAACCAATTTAGCAAGATTTCTGAGTTCAGCCATTGATACTACTAATATATCCTTCACAGATATTGAGAGAAAGGTGGCTCCGATATTATTTCAAGCATTTGAGACATTTCCATACTTAGCCCAAATCTCATACATAGGGATGGAAGGTCTCTTTTTCTCGTACTACAGTGATCATGATGAAGCTCTAGCTATGTACTCTAACTCATCATCTAGTTGGGGTACCTCAAATAAAACCTATATTCAACCCGTGAATGGTGAAACTGGACAAGTTCAAGGGGAAGCCATAGACATAAGATATAACCCCTTTATGAATGCAAGTTTGATTGGGGAAGCACTTAATGTGTCGTATGGGTTAGCCTCATTGGAAACCACGTGGGGCAATGATGGTGATCTTTTGTTCCTCAGCTCAGCTAGAATCACAAAAAGAGGAGTGATCTCTCTTGGGTTTTCAGCAACGGCAATAACTGATTTTGTCACTCCCATTGACCAACAAGGGACGAGGTCCTATTTGGCTACCAAAGATGGAAAAGTTCTTGTGCAAGGGATTCAACATTCCCCTTTGGTTATTTCTAATGATTCGGTTTCCTTCCAATCAGTGAATGATCCCACAAGTAATGAAGGCACTGTCTCATGCAAACATGAAGCCGCAGCTGCTAGCTTAAATATTCGAGATACTGAGTATTTAATTCACTGCTACACCATCGATATAATGGGAATAGAATCGGTGTATGTCTTGGCTGTTCCACAAAATGGACTTGTGTGCTTTGATCTCAATAACAAGAAAAAGGGTTTGATACTGTTTGTGGTAACGATGGTCACAATATTTATTGCTTTCGTCAGTTTTCTATTCATAAACTGTAGAGCCACGAGGCGAGAAATGCATTTGTGTGCCTCACTCATCAAACAGATGGAAGCCACCCAACAAGCTGAGAAAAAGAATATGAATAAGAGCATAGCTTTTGCGAGTGTGAGCCATGATGTTCGAGCTTCTCTAGCAGGCATTACCGGTTTGATAGATATCTCTTATGAGTTAGTTACCCCCGGTTCTGAATTGGAGACCAATTTGAAACAAATGAATGGTTGTACTCAAGACTTACTAGGACTGTTGAATTCTATACTTGACACAAGCAAAATAGAGGCAGGAAAAATGCAACTTGAGGAAGAGGAGTTTGATTTGTTCCATCTCCTAGAAGATGTAGTTGACTTTTACCATCCCGTGGCTATGAAGAAAGGTGTAGATCTCGTGTTTGACCCTTGTGATGGTTCTGTTGTGACATATTCATGCGTGAAAGGTGACAGGGGCAAACTAAAACAAGTTTTGTGTAATTTACTGAGCAATGCTGTAAAATTTACTGATGAGGGGCATATAGCGGTTCGTGCATGGACTCAGAAGCCAAGATTGAAGAACTCAACGGTCACTTGTAACCAATGTGATTTCAAGAAATATTTATCATGCTTTTTTCGTAACAAAAACGAAGTGCATGATGACGTGGAATCAGTGCATTCGATCCAAGAAAATCCGCAATCTATGGATTTTATATTTGAAGTGGATGACACAGGAAAAGGAATTCCTAAAGAGAATTACAAGTCTGTGTTTGAGAATTATGTCCAGGTCAAAGAAACTGCTCTTGGCCAAGGAGGAACTGGCTTGGGACTTGGGATTGTGCAGTCATTGGTGCGATTGATGCTTGGAGATATTGAAATTGTGGAGAAGGATACTGGTGAGAAAGGAACATGCTTCAGGTTCAACGTGCTCCTCACTTTATGCGATAGTGAGACAATGATAGATGGTAGCAGGGAAGGTATTGAGTGTGGAGCAGGAGAAAGCATTGATGGTACAAGTTCTGGTTTAAGAATTTGTTCCATGAGTCCTAGGTTACATATTCGTAGCTCATCTAGTCCCAAGCCTGAGGCTTCCCTTGTGGTTCTTTTGATTGCTGACGAGGAGCGTCAAAGGGCTTCACAAAGGTTCATGGAGAGGCTAGGGATCAAAGTTAAAGTTGTGAAGTCAGGGAAACATCTGTTTTATACTCTCAAGAAGATCAAGCAAAAGCGTCACCGTTTCAGTGAATCTTCAGATTCTAGTTCTGGGTCTACATCTCATAATTCTCTTGCCATAGCCACGAGGGTTCCTTTCAGTTCTACGGATGGAACTGAGCACATGGCTTTAGTTTTAAAGAAAACAGATATTGGATCTGGCCCCGGCTTCATTCTTATTGTGATTGATGCAAATGCAGGACCATTTTCTGAGCTATGTGGGACTGTATCCAGGTTCAAAAAAGACCTTGGCAACCCTTGTAAGGTTGTTTGGTTGGACAAGCCCTTAATGCGTAGGATCAACTTCAAGACCCTTGATGAAGATGACATTGTCATATCAAAACCATTTCATGGTAGCCGTTTGTTCCAAGCTATAAAGCTTCTTCCTGAGTTTGGTGGTGCTTGGCAAAGTAATCCTAGTAAGGCTAAGAGGGAAAGTAGCAATGAGAGAGCTGCATTGAAGACTTGTAAGGATTCAAGCTTGTCAAAATACATGCCTCCTCTGCTGGACAGATCACAAGTGCCTGCAAGTGATGAAAGTATTACATTTCAAAGTGCTGAACAAATTTGGAAGGGAAAACTAATAACCCCAGTTCATCAAGGAGAAATACAAGAGTGTGGGGAGTCATCAGGGTCTCACAAACCCTTGAGGGGTATGAAGTTTCTGATTGTTGAGGACTCTGAATTGTTGCGCAAGCTAGCCTCCACTACTTTGATTTCTCTTGGTGCAACTATGGAACAATGTGAGAATGGTGAACAAGCTGTGCGGCTAGTGGACGAGGGTCTATCTCGGGATTTTCCTAATCTTCCTTATGACTACATCTTAATGGACTGCCAGATGCCAGTAATGGATGGGCTTGAGGCAACGAAGTGGATACGAGAGATGGAAAAACCCTTTGGTATTCGCATTCCCATCATTGCATTGACTGCTTACACTGAAAAAATGACGACAGAAACTGGAATAGACTTTCATACAGTGAAGCCCATTAGGAAAGAGCATCTACTTGAAGCCATCAAATATATACAAGGTAAAGCGTGA	3276	0.4161	MALRPSSLVVLLAYGALIILFFLTPCWYVLVIRMEKRVNLNSKNIVSQLQSEIEHSAELLHPMKSSSTNLARFLSSAIDTTNISFTDIERKVAPILFQAFETFPYLAQISYIGMEGLFFSYYSDHDEALAMYSNSSSSWGTSNKTYIQPVNGETGQVQGEAIDIRYNPFMNASLIGEALNVSYGLASLETTWGNDGDLLFLSSARITKRGVISLGFSATAITDFVTPIDQQGTRSYLATKDGKVLVQGIQHSPLVISNDSVSFQSVNDPTSNEGTVSCKHEAAAASLNIRDTEYLIHCYTIDIMGIESVYVLAVPQNGLVCFDLNNKKKGLILFVVTMVTIFIAFVSFLFINCRATRREMHLCASLIKQMEATQQAEKKNMNKSIAFASVSHDVRASLAGITGLIDISYELVTPGSELETNLKQMNGCTQDLLGLLNSILDTSKIEAGKMQLEEEEFDLFHLLEDVVDFYHPVAMKKGVDLVFDPCDGSVVTYSCVKGDRGKLKQVLCNLLSNAVKFTDEGHIAVRAWTQKPRLKNSTVTCNQCDFKKYLSCFFRNKNEVHDDVESVHSIQENPQSMDFIFEVDDTGKGIPKENYKSVFENYVQVKETALGQGGTGLGLGIVQSLVRLMLGDIEIVEKDTGEKGTCFRFNVLLTLCDSETMIDGSREGIECGAGESIDGTSSGLRICSMSPRLHIRSSSSPKPEASLVVLLIADEERQRASQRFMERLGIKVKVVKSGKHLFYTLKKIKQKRHRFSESSDSSSGSTSHNSLAIATRVPFSSTDGTEHMALVLKKTDIGSGPGFILIVIDANAGPFSELCGTVSRFKKDLGNPCKVVWLDKPLMRRINFKTLDEDDIVISKPFHGSRLFQAIKLLPEFGGAWQSNPSKAKRESSNERAALKTCKDSSLSKYMPPLLDRSQVPASDESITFQSAEQIWKGKLITPVHQGEIQECGESSGSHKPLRGMKFLIVEDSELLRKLASTTLISLGATMEQCENGEQAVRLVDEGLSRDFPNLPYDYILMDCQMPVMDGLEATKWIREMEKPFGIRIPIIALTAYTEKMTTETGIDFHTVKPIRKEHLLEAIKYIQGKA	1091

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mupr5623g00005	1091	SMART	REC_2	965	1084	IPR001789	GO:0000160
	Mupr5623g00005	1091	Gene3D	-	945	1089	-	-
	Mupr5623g00005	1091	CDD	REC_hyHK_CKI1_RcsC-like	967	1084	-	-
	Mupr5623g00005	1091	SMART	HisKA_10	382	448	IPR003661	GO:0000155\|GO:0007165
	Mupr5623g00005	1091	PRINTS	Bacterial sensor protein C-terminal signature	597	607	IPR004358	GO:0016310\|GO:0016772
	Mupr5623g00005	1091	PRINTS	Bacterial sensor protein C-terminal signature	613	631	IPR004358	GO:0016310\|GO:0016772
	Mupr5623g00005	1091	PRINTS	Bacterial sensor protein C-terminal signature	579	593	IPR004358	GO:0016310\|GO:0016772
	Mupr5623g00005	1091	PANTHER	TWO-COMPONENT HISTIDINE KINASE	71	1086	-	-
	Mupr5623g00005	1091	SMART	HKATPase_4	498	655	IPR003594	-
	Mupr5623g00005	1091	Gene3D	-	369	449	-	-
	Mupr5623g00005	1091	SUPERFAMILY	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase	437	651	IPR036890	-
	Mupr5623g00005	1091	ProSiteProfiles	Histidine kinase domain profile.	389	655	IPR005467	-
	Mupr5623g00005	1091	Pfam	Response regulator receiver domain	968	1084	IPR001789	GO:0000160
	Mupr5623g00005	1091	SUPERFAMILY	Homodimeric domain of signal transducing histidine kinase	370	450	IPR036097	GO:0000155\|GO:0007165
	Mupr5623g00005	1091	Gene3D	-	450	659	IPR036890	-
	Mupr5623g00005	1091	Pfam	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase	498	653	IPR003594	-
	Mupr5623g00005	1091	CDD	HisKA	387	444	IPR003661	GO:0000155\|GO:0007165
	Mupr5623g00005	1091	ProSiteProfiles	Response regulatory domain profile.	966	1088	IPR001789	GO:0000160
	Mupr5623g00005	1091	SUPERFAMILY	CheY-like	961	1086	IPR011006	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mupr5623g00005	Mupr-Chr5623	36224	43037	Dispersed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mupr5623g00005	1	1090	Histidine Kinase Gene Family	AT2G47430	40.175	0.0	738

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TR	Others	Mupr5623g00005		HATPase_c	1.8e-24	CL0025

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mupr5623g00005	-		-	var:108325233	1327.77