Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr5618g00001 ATGGTAGTGAATAGGAGCAGTCTCGCACATTCAATTTTGCAGTCAAGCTACATAGCTTCCAACGCCCAAACTTTGTCAAGTAGAAGTCTTATCATGACAACCACTGCTAAATTACCAATTGGTGGAAATTTGTCGGCAACGTTGATATCTGCTACATCTGGTTTCACGCTTTTGTTCTTCTTGTCCTGTTTCTCTCTTCTTCAGCTTGGAGGCAACAATTTCCTTCATCTCCTCATGTTTTCCTCCACTTCCTCTTCTTTCATCCCCCACTTTGAGATCGGCATCCCCAAATTTAAGATCGGTGAGCCTTATAGGGAACCTAACAGTGACCGTGAATTGCTTTCGGAAATTAAAACGAACAAGAGAATCTACGAAGTGTTTTTGAGTTTCAGAGGAGAAGACACGCGGTTTTCATTCGTTTCACATCTCCAGGCCTCTCTTCAGAACGCGGGAATAATTGTTTTCAAGGATGACGAGTCACTTGGAAGGGGAGATGAAATTTCAGAATCGCTTTTGCGAGCAATCGAGCAATCTGAATGTAGTGTAGTTGTATTCTCAAGGAATTATGCAGAGTCGGGATGGTGTATGAAAGAGTTGGAGAAAATAATGGAGTGCCACAGAACCATACGGCAGATAGTTGTGCCAGTGTTCTATGATGTTGATCCCTCGGAAGTACGTCATCAAAAGGGCGAGTTTGGAAAAGGATTTGAAAATCTTGAGGAGAGGCTGTACAAGGCATGGTATAGGCAGATTGATTTTTTATCATCAGACAAGCTAAACAAATTATGTACCTCCATACCGAGGGGGGAGATACTTCGCCAGGCTGCTGCCATCGCAGGGCATGTAGTCCCAAATTCCAGGAATGAAAGTGAGGCTATAAAAAATATTGTTGAAAATGTTACTCGTTTATTAGATAAGACAGAATTGTTCATTGCCCATAATCCAGTGGGAGTAGAATCTCGAGTACAAGATATAATTCATTTGTTAGATCATAAACCGTCAAATGATGTTCTACCATCAAATGATGTTCTACCATCAAATGATGTTCTACTACTAGGGATATGGGGAATGGGAGGCATTGGTAAAACAACCCTTGCAAAAGCCATTTACAATAAGATTGGACGCAATTTTGAGGGAAGGAGCTTCCTTGCACATATTAGGGAAGTTTGGGGACAATACACTGGCAGAGTCCATTTACAAGAACAACTTCTGTTTGATATCTACAAAGGAAATAAAATAGAGTTACTTAACATTGAATCAGGAAAAAATGTATTAGAGAAAAGGCTTCGTCACAAAAAGGTACTTGTTGTACTTGATGATGTGAATGAATTAGATCAATTGAATGCTTTATGTGGGAGTTGGACATGGTTTGGTTCTGGGAGTAGAATAATCATCACAACCAGAGATAAAGATGTACTTAGAGGGAAGAAAGTTAACAAAATATATAAGATGAAAGAAATGAAAGAAGGTGAATCTATTGAGCTTTTTAGTTGGCACGCATTCAAGCAAGCAAGTCCTAGAGAAGATTTTGTCGAACTTTCTAGAAATGTAATTAGATATTCCAGTGGATTGCCACTAGCTCTTGAAGTCCTCGGGTCTTATTTGTTTGATATGGAG 1617 0.397 MVVNRSSLAHSILQSSYIASNAQTLSSRSLIMTTTAKLPIGGNLSATLISATSGFTLLFFLSCFSLLQLGGNNFLHLLMFSSTSSSFIPHFEIGIPKFKIGEPYREPNSDRELLSEIKTNKRIYEVFLSFRGEDTRFSFVSHLQASLQNAGIIVFKDDESLGRGDEISESLLRAIEQSECSVVVFSRNYAESGWCMKELEKIMECHRTIRQIVVPVFYDVDPSEVRHQKGEFGKGFENLEERLYKAWYRQIDFLSSDKLNKLCTSIPRGEILRQAAAIAGHVVPNSRNESEAIKNIVENVTRLLDKTELFIAHNPVGVESRVQDIIHLLDHKPSNDVLPSNDVLPSNDVLLLGIWGMGGIGKTTLAKAIYNKIGRNFEGRSFLAHIREVWGQYTGRVHLQEQLLFDIYKGNKIELLNIESGKNVLEKRLRHKKVLVVLDDVNELDQLNALCGSWTWFGSGSRIIITTRDKDVLRGKKVNKIYKMKEMKEGESIELFSWHAFKQASPREDFVELSRNVIRYSSGLPLALEVLGSYLFDME 539
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr5618g00001 539 Gene3D - 121 301 IPR035897 -
Mupr5618g00001 539 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 303 537 IPR027417 -
Mupr5618g00001 539 Gene3D - 302 481 IPR027417 -
Mupr5618g00001 539 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 124 537 IPR044974 GO:0006952
Mupr5618g00001 539 Pfam NB-ARC domain 348 535 IPR002182 GO:0043531
Mupr5618g00001 539 PRINTS Disease resistance protein signature 521 535 - -
Mupr5618g00001 539 PRINTS Disease resistance protein signature 351 366 - -
Mupr5618g00001 539 PRINTS Disease resistance protein signature 428 442 - -
Mupr5618g00001 539 SMART till_3 123 269 IPR000157 GO:0007165
Mupr5618g00001 539 FunFam Disease resistance protein (TIR-NBS-LRR class) 120 306 - -
Mupr5618g00001 539 Gene3D - 486 539 IPR042197 -
Mupr5618g00001 539 ProSiteProfiles TIR domain profile. 122 304 IPR000157 GO:0007165
Mupr5618g00001 539 Pfam TIR domain 124 300 IPR000157 GO:0007165
Mupr5618g00001 539 SUPERFAMILY Toll/Interleukin receptor TIR domain 115 244 IPR035897 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr5618g00001 Mupr-Chr5618 45 3941 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr5618g00001 119 533 WRKY Transcription Factor Family AT4G12020 25.776 4.32e-30 124
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr5618g00001 - - gmx:100808685 543.117