Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr5617g00001 ATGACAACCACCGCTAAATTACCAAGTTTCATCCTCAATGCAACGTTGGGATCTGCTACATCTGGTTTCACGCTTTTGTTCTTCTTGTCCTGTTTATTATCTTTTCTTCAGCTTGGAGGCAACAATTTCCTTCATCTCCTCATCCTCATGTCTTCCTCCACTTCGTCTTTTTTCATCCCCGACTTTGAGATCGATGAGGCGCTTTGTATGGAACGTGACCGTAAATTGACTTCGGAAATTAAAACGAACAAGAGAATATACGAAGTGTTTTTGAGTTTCAGAGGAGAAGACACTCGCTTTTCTTTCGTTTCACATCTCCACGCTTCTCTTCAGAACGCGGGAATAATTGTTTTCAAGGATGACGAGTCACTTCGAAGGGGAGATGAAATTTCAGAGTCGCTTTTGCGAGCAATCGAGCAGTCTGAATGTAGTGTAGTTGTATTCTCAAGGAATTACGCAGAGTCGGGATGGTGTATGAAAGAGTTGAAGAAAATAATGGAGTGCCACAGAACCATAGGGCAGGTAGTTGTGCCTGTGTTCTATGATGTTGATCCTTCCGAAGTACGTCATCAAACGGGCGAGTTTGGAAAAGGATTTGAAAAGCTTGAGACGAGGATTTCAACAGAGCATGGGGAGACGGCACGGCATAGGCGGATTCGGTTAAACAAATTAAAAAGGGACCTCAAGAGGAGGGAGATACTTGGCGAGGCTGCTGCCATCGCGGGGCATGTAGTCCCAAATTCCAGGAACGAAAGTGAGGCTATAAAAAATATTGTTGAAAATGTTACTCGTTTATTAGATAAGACAGAATTGTTCATTGCCCATAATCCAGTGGGAGTAGAATCTCGAGTACAAGATATAATTCATTTGTTAGATCATAAATCATCAAATGATGTTCTACTACTAGGGATATGGGGAATGGGAGGCATCGGTAAAACAACCCTTGTAAAAGCCATTTACAATAAGATTGGACGCAATTTTGAGGGAAGGAGTTTCCTTGCACATATTAGGGAAGTTTGGGGGCAATACACTGGCAGAGTCCATTTACAAGAACAACTTCTGTTTGATATCTACAAAGGAAGTAAAATAGAGTTACATAACATTGAATCAGGAAAAAATGTATTAGAGAAAAGACTTCGTCACAAAAAGGTACTTGTTGTACTTGATGATGTGAATGAATTAGACCAATTGAATGCTTTATGTGGGAGTCGGACATGGTTTGGTTCTGGGAGTAGAATAATCATCACAACCAGAGATAAAGATGTGCTTAGAGGGAAGAAAGTTAACAAAATATATAAGATAAAAGAAATGAATGAAGGTGAATCTATTGAGCTTTTTAGTTGGCACGCATTCAAGCAATCAAGTCCAAGAGAAGATTTTGTCGAACTTTCTAGAAATGTAATTAGATATTCCAGTGGATTGCCACTAGCTCTTGAAGTCCTCGGGTCTTATTTGTTTGATATG 1464 0.401 MTTTAKLPSFILNATLGSATSGFTLLFFLSCLLSFLQLGGNNFLHLLILMSSSTSSFFIPDFEIDEALCMERDRKLTSEIKTNKRIYEVFLSFRGEDTRFSFVSHLHASLQNAGIIVFKDDESLRRGDEISESLLRAIEQSECSVVVFSRNYAESGWCMKELKKIMECHRTIGQVVVPVFYDVDPSEVRHQTGEFGKGFEKLETRISTEHGETARHRRIRLNKLKRDLKRREILGEAAAIAGHVVPNSRNESEAIKNIVENVTRLLDKTELFIAHNPVGVESRVQDIIHLLDHKSSNDVLLLGIWGMGGIGKTTLVKAIYNKIGRNFEGRSFLAHIREVWGQYTGRVHLQEQLLFDIYKGSKIELHNIESGKNVLEKRLRHKKVLVVLDDVNELDQLNALCGSRTWFGSGSRIIITTRDKDVLRGKKVNKIYKIKEMNEGESIELFSWHAFKQSSPREDFVELSRNVIRYSSGLPLALEVLGSYLFDM 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr5617g00001 488 PRINTS Disease resistance protein signature 301 316 - -
Mupr5617g00001 488 PRINTS Disease resistance protein signature 471 485 - -
Mupr5617g00001 488 PRINTS Disease resistance protein signature 378 392 - -
Mupr5617g00001 488 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 31 - -
Mupr5617g00001 488 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 265 487 IPR027417 -
Mupr5617g00001 488 FunFam Disease resistance protein (TIR-NBS-LRR class) 83 268 - -
Mupr5617g00001 488 Gene3D - 84 262 IPR035897 -
Mupr5617g00001 488 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 87 487 IPR044974 GO:0006952
Mupr5617g00001 488 ProSiteProfiles TIR domain profile. 85 266 IPR000157 GO:0007165
Mupr5617g00001 488 Pfam TIR domain 87 262 IPR000157 GO:0007165
Mupr5617g00001 488 Gene3D - 436 487 IPR042197 -
Mupr5617g00001 488 Gene3D - 263 431 IPR027417 -
Mupr5617g00001 488 SUPERFAMILY Toll/Interleukin receptor TIR domain 77 203 IPR035897 -
Mupr5617g00001 488 Pfam NB-ARC domain 281 485 IPR002182 GO:0043531
Mupr5617g00001 488 SMART till_3 86 231 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr5617g00001 Mupr-Chr5617 3990 7446 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr5617g00001 278 486 WRKY Transcription Factor Family AT5G45050 35.407 3.31e-31 126
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr5617g00001 - - gmx:100808685 560.066