Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr5613g00004 ATGGATCATGTTATTGGTGGAAAGTTCAAGCTTGGTAGGAAGATTGGGAGTGGATCATTTGGAGAGCTTTACTTAGGTGTTAATGTACAAAGTGGAGAGGAGGTGGCTGTCAAGCTGGAATCTGTGAAGACTAAGCATCCCCAGCTTCACTATGAGTCAAAATTGTATATGCTTCTTCAAGGGGGGACTGGTATACCCCATCTAAAATGGTTTGGAGTTGAGGGTGACTACAATGTCATGGTTATTGACCTCCTTGGGCCAAGTCTTGAAGACTTGTTTAACTATTGCAACAGGAAATTATCTCTGAAAACAGTTCTGATGCTGGCAGATCAACTAATAAACAGAGTTGAGTACATGCACTCCCGGGGTTTTCTGCATCGTGATATAAAGCCTGACAACTTTTTAATGGGTTTAGGCCGTAAGGCCAATCAGGTATACATAATTGATTATGGCCTTGCAAAAAAATATCGGGATCTTCAAACACATAAGCATATACCATACAGGGAAAACAAAAACCTCACTGGAACTGCTCGGTATGCAAGTGTTAATACTCATCTGGGAGTTGAACAAAGCAGAAGAGATGATCTAGAATCTCTTGGTTATGTGCTCATGTACTTTTTGAGAGGAAGTCTCCCATGGCAAGGCTTGAGAGCTGGCACTAAAAAGCAAAAGTATGACAAGATAAGTGAAAAGAAGATGCTTACTCCAATAGAGGTCTTATGCAAGTCATATCCATTGGAATTCACATCATACTTCCACTACTGCCGAACGTTGCGGTTTGAAGATAAGCCTGATTATTCTTATCTTAAGAGACTCTTTCGTGACCTATTCATCCGAGAAGGCTATCAGTTTGATTATGTATTTGATTGGACTATGTTGAAGTATCCCCAAATTGGATCCAGTTCTAGATCCCGACCAAGTGGGAAACCAGTCATAAACCCAGGACAATCAGGAGATAGAATAGAACGGCCTTCAGGGGGACCAGAGATTCGGGATAGATTCTCAGGTGCAGTTGAGGCATTTGCAAGGAGGAATGGCTCTGGACTTGGTCTGCATGGTGATCATTCTAGGTATAGGTCTTCGGATGATGTGCCATCTTCCAAAGACGTGCAAGCTGATTCTGAGAGGCCTCGCAGCTCTTCTCGGAATGGCAGTTCTTCAAAAAGGCATGTCTTGTCAGGCAGCCGGCCAAGCTCTTCTGGTGAGCCTAGTGAAAGCCGTGCTAGCCGACTGGTCTCAAGCAGTGGACGACTATCAACAACTCAGAGACTTCAACCTGGTTTTGAGTCCAAAACATCTTTAACTCGGGCTTCAGGGACCAGAGGTGGTCGTGATGATCCACTCAGGAGCTTTGAACTCCTGTCACTTGGCGAAATGTCTCGAGTAAGTTTATTGAATCATGACTAG 1407 0.4378 MDHVIGGKFKLGRKIGSGSFGELYLGVNVQSGEEVAVKLESVKTKHPQLHYESKLYMLLQGGTGIPHLKWFGVEGDYNVMVIDLLGPSLEDLFNYCNRKLSLKTVLMLADQLINRVEYMHSRGFLHRDIKPDNFLMGLGRKANQVYIIDYGLAKKYRDLQTHKHIPYRENKNLTGTARYASVNTHLGVEQSRRDDLESLGYVLMYFLRGSLPWQGLRAGTKKQKYDKISEKKMLTPIEVLCKSYPLEFTSYFHYCRTLRFEDKPDYSYLKRLFRDLFIREGYQFDYVFDWTMLKYPQIGSSSRSRPSGKPVINPGQSGDRIERPSGGPEIRDRFSGAVEAFARRNGSGLGLHGDHSRYRSSDDVPSSKDVQADSERPRSSSRNGSSSKRHVLSGSRPSSSGEPSESRASRLVSSSGRLSTTQRLQPGFESKTSLTRASGTRGGRDDPLRSFELLSLGEMSRVSLLNHD 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr5613g00004 468 PANTHER CASEIN KINASE-RELATED 9 402 - -
Mupr5613g00004 468 CDD STKc_CK1_delta_epsilon 8 282 - -
Mupr5613g00004 468 FunFam Casein kinase 1-like protein 1 329 - -
Mupr5613g00004 468 MobiDBLite consensus disorder prediction 355 376 - -
Mupr5613g00004 468 SUPERFAMILY Protein kinase-like (PK-like) 4 290 IPR011009 -
Mupr5613g00004 468 ProSiteProfiles Protein kinase domain profile. 9 278 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr5613g00004 468 Gene3D Transferase(Phosphotransferase) domain 1 1 318 - -
Mupr5613g00004 468 Pfam Protein kinase domain 10 227 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr5613g00004 468 MobiDBLite consensus disorder prediction 377 439 - -
Mupr5613g00004 468 ProSitePatterns Serine/Threonine protein kinases active-site signature. 124 136 IPR008271 GO:0004672|GO:0006468
Mupr5613g00004 468 MobiDBLite consensus disorder prediction 299 330 - -
Mupr5613g00004 468 SMART serkin_6 9 435 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr5613g00004 468 MobiDBLite consensus disorder prediction 345 448 - -
Mupr5613g00004 468 FunFam Putative Casein kinase I 1 85 - -
Mupr5613g00004 468 ProSitePatterns Protein kinases ATP-binding region signature. 15 38 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr5613g00004 Mupr-Chr5613 32003 39175 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr5613g00004 8 213 MAP Kinase Kinase Kinase AT3G06030 25.463 9.27e-14 71.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1 Mupr5613g00004 Pkinase 4.4e-26 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr5613g00004 K08960 - gmx:100804897 821.617