Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr5613g00003 ATGGATAGGTGCTGGTTTAATAAGTTCAAGCCAAAGGACAAAACACAGTCTTCAAAAAACAAGGAAACTACAGGCATTGCAAAAGAAGGGTCAAAACCCCCAACAAATGAAGAAGCACCTTCAAATGTGACCAAACAGAAGGTTGCAGCTGCAAAGCAGTACATAGAAAACCATTATAAGAAACAGATGAAGGACTTGCAGGAGAGAAAGGAACGACGTAATATGCTAGAAAAAAAGTTGGCTGATGCTGAAGTCTCTGAGGAAGAGCAGAACAATTTGCTTAAGTATTTTGAGAAAAGGGAGAGAGAATACATGCGCCTTAAGCGGCATAAAATGGGGGCTGATGATTTTGAGCCCCTGACTATGATAGGGAAGGGTGCATTTGGAGAGGTTAGAGTCTGCCGAGAGAAGGCATCTGGGCATGTATATGCTATGAAGAAACTTAAGAAATCAGAGATGCTTCGCAGAGGCCAGGTTGAACATGTAAAAGCTGAGAGGAATCTACTTGCAGAAGTTGACAGCAATTGCATTGTAAAGCTTTATTATTCCTTTCAAGATGAAGAGAATTTATATCTCATAATGGAGTATCTACCTGGAGGTGATATGATGACGTTGCTCATGCGGAAGGATATACTGACAGAAGATGAGGCCAGGTTCTATGTTGGGGAGACTGTCCTAGCTATAGAGTCGATTCATAAACATAATTATATTCATAGAGATATTAAGCCTGACAACTTGCTGCTAGATACAAATGGTCACATGAAATTATCAGACTTTGGATTATGTAAACCACTAGACTGCAGTAATCTTCAGGAAAAGGACTTCTCTATTGGAAGCAACAGAAGTGGAGCCCTTCAGAGCGATGGACGTCCCTTGGCTCCTAAAAGAAGCCAACAGGAGCAGCTGCAGCATTGGCAGAAAAATAGACGAATGCTTGCCTATTCTACGGTTGGAACACCTGACTATATTGCCCCTGAAGTTCTTCTGAAGAAAGGATATGGCATGGAATGTGATTGGTGGTCCCTGGGAGCGATAATGTATGAAATGCTAGTGGGGTATCCGCCCTTTTATTCAGATGAACCAATGTTGACTTGTAGAAAGATAGTAAATTGGAGAAATTATTTAAAATTTCCAGAAGAAGTTAAACTTTCAGCAGAGGCAAAGGATCTTATTAGTAGACTCCTATGTAATGTGGACCAGAGGCTTGGAACCAAAGGGGCTGATGAAATAAAGGTGGCTCACTCATGGTTCAAAGGTATTGAATGGGACAAATTGTACCAAATGAAGGCTGCTTTCATTCCTGAGGTTAACGATGAATTAGATACTCAAAATTTTGAGAAGTTTGAAGAGGTTGACAACCAAACTCAACCTTCCTCAAAATCAGGGCCATGGAGAAAGATGCTATCATCTAAAGATGTTAACTTTGTCGGCTACACATATAAGAACTTTGAAATCGTGAATGATGATCAACTACCTGAAATTGCCGAATTGAAGAAGAAGAGCACAAAAACTAAGCGGCCATCTATTAGGACCCTATTTGATGATGAATCGGCTACAGCTGCCAATCAACCTGTCCAAGGGAGCTTCGTAAAACTCTTACCTACTCAACCAGAAGCTCCTGAGAAGAGTGAATCTCAATGA 1641 0.4089 MDRCWFNKFKPKDKTQSSKNKETTGIAKEGSKPPTNEEAPSNVTKQKVAAAKQYIENHYKKQMKDLQERKERRNMLEKKLADAEVSEEEQNNLLKYFEKREREYMRLKRHKMGADDFEPLTMIGKGAFGEVRVCREKASGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSNCIVKLYYSFQDEENLYLIMEYLPGGDMMTLLMRKDILTEDEARFYVGETVLAIESIHKHNYIHRDIKPDNLLLDTNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNRSGALQSDGRPLAPKRSQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPPFYSDEPMLTCRKIVNWRNYLKFPEEVKLSAEAKDLISRLLCNVDQRLGTKGADEIKVAHSWFKGIEWDKLYQMKAAFIPEVNDELDTQNFEKFEEVDNQTQPSSKSGPWRKMLSSKDVNFVGYTYKNFEIVNDDQLPEIAELKKKSTKTKRPSIRTLFDDESATAANQPVQGSFVKLLPTQPEAPEKSESQ 546
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr5613g00003 546 CDD STKc_NDR_like 115 481 - -
Mupr5613g00003 546 Pfam Protein kinase domain 119 416 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr5613g00003 546 Coils Coil 59 93 - -
Mupr5613g00003 546 SMART serkin_6 117 417 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr5613g00003 546 CDD MobB_NDR_LATS-like 51 112 - -
Mupr5613g00003 546 Pfam Protein kinase C terminal domain 436 480 IPR017892 GO:0004674|GO:0005524|GO:0006468
Mupr5613g00003 546 SUPERFAMILY Protein kinase-like (PK-like) 92 470 IPR011009 -
Mupr5613g00003 546 MobiDBLite consensus disorder prediction 515 530 - -
Mupr5613g00003 546 ProSitePatterns Serine/Threonine protein kinases active-site signature. 236 248 IPR008271 GO:0004672|GO:0006468
Mupr5613g00003 546 ProSiteProfiles AGC-kinase C-terminal domain profile. 418 490 IPR000961 GO:0004674|GO:0005524|GO:0006468
Mupr5613g00003 546 PANTHER SERINE/THREONINE-PROTEIN KINASE 28 466 - -
Mupr5613g00003 546 ProSitePatterns Protein kinases ATP-binding region signature. 123 146 IPR017441 GO:0005524
Mupr5613g00003 546 FunFam Non-specific serine/threonine protein kinase 315 435 - -
Mupr5613g00003 546 MobiDBLite consensus disorder prediction 1 19 - -
Mupr5613g00003 546 FunFam Non-specific serine/threonine protein kinase 88 200 - -
Mupr5613g00003 546 MobiDBLite consensus disorder prediction 1 47 - -
Mupr5613g00003 546 Gene3D Transferase(Phosphotransferase) domain 1 203 434 - -
Mupr5613g00003 546 FunFam Non-specific serine/threonine protein kinase 201 268 - -
Mupr5613g00003 546 SMART pkinase_C_6 418 482 IPR000961 GO:0004674|GO:0005524|GO:0006468
Mupr5613g00003 546 MobiDBLite consensus disorder prediction 278 300 - -
Mupr5613g00003 546 Gene3D Phosphorylase Kinase; domain 1 107 202 - -
Mupr5613g00003 546 ProSiteProfiles Protein kinase domain profile. 117 417 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr5613g00003 546 MobiDBLite consensus disorder prediction 499 546 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr5613g00003 Mupr-Chr5613 18662 26398 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr5613g00003 3 544 AGC Kinase Gene Family AT3G23310 81.284 0.0 896
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_NDR Mupr5613g00003 Pkinase 1.5e-62 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr5613g00003 K08790 - gmx:100805439 1063.14