Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr5613g00001 ATGCCTATGAATGCTAACAATATTTTTAACATTAGTATTTTCAACTCTGGACAAGATCCTCACCAAAACAACCAAAATGGTTTTAGATGTAGATTATGCAATCGTGTTTTCTCTACCTTCCAAGCACTCACAGCACACGTCGAGTCTCATTTTGTTCAAGAAAACCCTATCATGAGAAGTTTGTATTCACCAAATCATGTTAACTCTCAAAGAGAAATGATTCCCAACCTTTTGCAACCTAATTTCCCCAGACCAATGATGGTGCAAGAACCAAGAAATCTTGTTAACAACAGGGTTTTCCATGCACCACCACCACAACCTATGGTGATGCCTCGACCCAGGGCAAACTCATTTTCTTATGCTATCCAACAAGTGGTTGTTGCTTCACAACCACTTCAAGGTCCACCACAGGCTATATTATCTGCCGAGAATAATGTTGCTGAAATGACACGATTGCTTGCTCTACCAATCCACCAAAGGGAGATGGAGGTTTCTCCAATTGATGGAACTAAGCCATATATCAACTTGCTAGATAAATCCATCAACAACAATAGATCTTTTAATCGAACAATCATTAATGGTGATATCTCAAATCTTGGGAACATTGATCCTACTCTTAAACTCCCTCTATACCTAAATAGTGAATCACCCATAGTTGACCATGTCTAG 669 0.3901 MPMNANNIFNISIFNSGQDPHQNNQNGFRCRLCNRVFSTFQALTAHVESHFVQENPIMRSLYSPNHVNSQREMIPNLLQPNFPRPMMVQEPRNLVNNRVFHAPPPQPMVMPRPRANSFSYAIQQVVVASQPLQGPPQAILSAENNVAEMTRLLALPIHQREMEVSPIDGTKPYINLLDKSINNNRSFNRTIINGDISNLGNIDPTLKLPLYLNSESPIVDHV 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr5613g00001 222 ProSiteProfiles Zinc finger C2H2 type domain profile. 28 55 IPR013087 -
Mupr5613g00001 222 ProSitePatterns Zinc finger C2H2 type domain signature. 30 50 IPR013087 -
Mupr5613g00001 222 SMART c2h2final6 28 50 IPR013087 -
Mupr5613g00001 222 Pfam C2H2-type zinc finger 28 50 - -
Mupr5613g00001 222 SUPERFAMILY beta-beta-alpha zinc fingers 15 50 IPR036236 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr5613g00001 Mupr-Chr5613 3102 6182 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Mupr5613g00001 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr5613g00001 - K19871 pvu:PHAVU_007G056300g 197.593