Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr5605g00003 ATGGAAAGCCAGTTCTTTCTCAATGCTGGGGTGTCACAAACACAACAACACTCCCTTCACTTTGAACCTTCTCCACCACCACCTCCTTCTTCAGTGTGGCAACAATCACTCTCACAAACCATGGGAATTCAACCAACAGTTATGAATTGTTCTGTCTCTGAGAAAACCCAGGATTGCTTTTACAACCCCAATTGGGACAAGTCAACAGATCATGCCCTTCACCACTTTGATTCCTCAGCACTGAGTTCAATGGTATCATCCCCATCCTCATCATCCAACCCCAACAACATCACCAACATGTCCAATGAGAATTTCATCATCAGGGAATTAGTGGGGAAATTGGGAACTATTGGAAGAAGCTCTGATGAGATCCCACAACACTCTCCTCACCCTTTGGCTGTGGCATCTTCTTACATGAACAGTAATGGAAATAACAGCACCAACACCTCTTGTTACACCACCCCTTTGAGTTCCCCTCCAAAGGTGAACATTGTCCACAGTTTGGTGAATGAGAGGTTGACAAATTTGGGAGGAAAGCCAATGGCTTTGAGTTCCCCTGTGGCTGAATTCTCAGCTGATCCTGGCTTTGCTGAGAGGGCTGCAAAGTTCTCTTGCTTTGGCAACAGGAGTTTCAATGATAGGAGTGTTCAATTGGGGGTCAACAATGGTGAATTGACTCAGAGATCTGCACCAGTAATGGAGCATGATGGGAAGTTACCTAGAGTCTCAAGTAGTCCATTGCTGAAGACACTTGGATCTCAAATGGGTGCCCTAGAGAACAAGAATTCAGCATTTCAGGAGCAGGAGAAAATGGAAATGGCTAATTCTCAAGAGGAATCTACAATTTCTGAGCAAACTCCAAATGGAGAAACTGGGGTCAAAACTTCCCAAGATGTGAATTCCAGGAAAAGAAAAGCTTCTTCCAAAGGAAAAGCCAAAGAAACTTCAAACTCTACTAACCCTTCCAAGGGTGTTGAAGCCAGTGAGGATTCAAATTCAAAGCGCAGCAAGACAAATGAGGTTGAGGGAAATGAAAATGATAGAGTGAAGGTTGAGGAAGAGTCCAAAGCAGTGGAAGAAAAACCGAACAAAAGTAACTCAAAACCTCCAGAGCCTCCAAAAGACTATATTCATGTAAGAGCAAGAAGAGGCCAAGCCACTGACAGCCACAGTCTTGCAGAACGTGTACGGAGGGAGAAAATCAGTGAGAGGATGAAGCTGCTCCAAGATCTTGTACCAGGTTGCAATAAGGTCACTGGCAAGGCACTTATGTTAGATGAAATTATAAATTATGTTCAGTCATTGCAGCGTCAAGTTGAGTTCCTGTCTATGAAGTTGGCTTCTGTGAACACAAGGATGGATCTTAACATGGAGAGTCTTGTTTCAAAAGATGTATTTCAATCAAATAATTTTTTAGCAACACACCCAAATCCAATATTCCCATTAGATTCCTCAGCACAAGCCTTTTATGGGCACCAGTCTCACCAAAACCCAGCTATCCATAATAACATACCTAACAGAACGGTGACCCACTGCTCAGTGGACCCATTGGACACTTCTTTGTTCCAAAATCTTGGCTTGCAGTTACCTCCCCTAAATGGGTTTAATGAAGCTGCCTCTCAGTTTCCATTAACATTCTGTGAGGAAGATCTCCACACCATTGTTCAGATGGGGTTTGGCCAAACTGCTAACAGGAAAACACCAATACAATCCCCAAGATTCAACGGTTCAAATAATGTACCAGAGATGAAAGTTGAGCTCTGA 1764 0.4342 MESQFFLNAGVSQTQQHSLHFEPSPPPPPSSVWQQSLSQTMGIQPTVMNCSVSEKTQDCFYNPNWDKSTDHALHHFDSSALSSMVSSPSSSSNPNNITNMSNENFIIRELVGKLGTIGRSSDEIPQHSPHPLAVASSYMNSNGNNSTNTSCYTTPLSSPPKVNIVHSLVNERLTNLGGKPMALSSPVAEFSADPGFAERAAKFSCFGNRSFNDRSVQLGVNNGELTQRSAPVMEHDGKLPRVSSSPLLKTLGSQMGALENKNSAFQEQEKMEMANSQEESTISEQTPNGETGVKTSQDVNSRKRKASSKGKAKETSNSTNPSKGVEASEDSNSKRSKTNEVEGNENDRVKVEEESKAVEEKPNKSNSKPPEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSMKLASVNTRMDLNMESLVSKDVFQSNNFLATHPNPIFPLDSSAQAFYGHQSHQNPAIHNNIPNRTVTHCSVDPLDTSLFQNLGLQLPPLNGFNEAASQFPLTFCEEDLHTIVQMGFGQTANRKTPIQSPRFNGSNNVPEMKVEL 587
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr5605g00003 587 MobiDBLite consensus disorder prediction 564 578 - -
Mupr5605g00003 587 CDD bHLH_AtBPE_like 375 460 - -
Mupr5605g00003 587 MobiDBLite consensus disorder prediction 118 140 - -
Mupr5605g00003 587 SMART finulus 391 441 IPR011598 GO:0046983
Mupr5605g00003 587 MobiDBLite consensus disorder prediction 268 296 - -
Mupr5605g00003 587 MobiDBLite consensus disorder prediction 328 376 - -
Mupr5605g00003 587 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 265 498 IPR024097 GO:0006355
Mupr5605g00003 587 Coils Coil 248 268 - -
Mupr5605g00003 587 FunFam Basic helix-loop-helix transcription factor 382 455 - -
Mupr5605g00003 587 Pfam Helix-loop-helix DNA-binding domain 389 436 IPR011598 GO:0046983
Mupr5605g00003 587 Coils Coil 341 361 - -
Mupr5605g00003 587 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 385 435 IPR011598 GO:0046983
Mupr5605g00003 587 MobiDBLite consensus disorder prediction 15 36 - -
Mupr5605g00003 587 Gene3D - 382 458 IPR036638 GO:0046983
Mupr5605g00003 587 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 383 454 IPR036638 GO:0046983
Mupr5605g00003 587 Coils Coil 432 452 - -
Mupr5605g00003 587 MobiDBLite consensus disorder prediction 227 246 - -
Mupr5605g00003 587 MobiDBLite consensus disorder prediction 312 327 - -
Mupr5605g00003 587 MobiDBLite consensus disorder prediction 268 376 - -
Mupr5605g00003 587 MobiDBLite consensus disorder prediction 564 587 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr5605g00003 Mupr-Chr5605 12826 16062 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr5605g00003 1 546 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G07340 41.410 7.73e-108 329
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mupr5605g00003 HLH 4.7e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr5605g00003 - - gmx:100801233 877.085