Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr5601g00010 ATGGATTTCCAGGGATTCCTAAACGACTTGCAGGATTGGGAACTTTCTAGAAAGGATAAAGCACGAAAAGTGAATTCACAAAAGGAAAATGGTTCATCTTCTCACCATACTGGATCCGTGGGTGTGGGGAAGGCATCAAGAGGAGATACTATTTCTTTTGATCGTGCAAGAAATTCTCCAGGACAGTATGATTTATCAAGAATTAATGATCCTTTCAATCGTGTGCAAAGTAGTTTTGTTCCTGAAGATGTTCCCGATGCTGCTTCCGAGAAAGACCTGGGTAATGAATTTTTCAAGCAGAAAAAGTTTAAGGAAGCTAGAGACTGCTATTCAAGGAGCATTGCCTTATCACCAACAGCTGTAGCATATGCAAATAGGGCAATGGCCAATATCAAGCTAAGAAGGCAAGCTTACATTTTTGCTGAGGATGACTGTACAGAGGCCTTAAACCTTGATGATCGTTATATAAAAGCATACTCACGAAGAGCAACAGCTAGAAAAGAACTTGGAAAAGTTAAAGAATCAATGGAGGATGCTGAATTTGCGTTGAGGTTGGAACCAAGCAATCAAGAAATCAAGAAACAGTTTACTGATGCTAAATCTTTGTACGAGAAAAAAGCATCAGGAGCACTGAGAAGCACTGTTCAGGGAACTCAAAAAGTGGGAAAGTCAGAGGAAAAAGTTAATGGAGGCAGCATCCCCTCCAGTTCACGTGGTACTCAGAAGTCTGGGCCGGCTGAAGTTCATCATCATAAAAAGGGTAACGAGTGGCAAATACCTGTTAAAGAATCACTCTTAATGGAGGAAGTTGATAGCAGAGATACAAAAGCCAGAAGCAGGGCTCAAGAACAAGAAGGTGATGGTTCTAAGGACAGTTTGGGTGCAAGCAACAGTTTGGAGCAGAGAGATAACAGAATTACTAAGCTGGAAATGAAAGCATCTATTCAACAGCTTGCTTCTCGTGCCACTTCTAGAGCCATGGCTGAAGCTGCCAAAAACATAACACCACCAACTACAGCTTATCAGTTTGAGGCCTCTTGGAGAGCATTTTCAGGTGATCTTGCTCTGCAGGCTCGTCTATTAAAGGCTGTATCTCCCCATGAATTACCAAAAATTTTCAAAAATGCCTTATCTTCTACCTTGCTAATGGACATCATCAAGTGTCTTGCATCCTTTTTCACTGAAGACATAGATTTGGTTGTCAGTTATATGGAACATTTGACCAAAGTACCAAGATTTGACATGATTATAATGTGCCTTTCATCAACAAATAAGGATGATATACGCAAGATCTGGGATAAAGTGTTCTATAGTGAGGCAACTCCAATTGAGCAAGCAGAGATTCTGGACAGCCTCCGATCAAAATTTTGCCTTGGACAGTAA 1383 0.4093 MDFQGFLNDLQDWELSRKDKARKVNSQKENGSSSHHTGSVGVGKASRGDTISFDRARNSPGQYDLSRINDPFNRVQSSFVPEDVPDAASEKDLGNEFFKQKKFKEARDCYSRSIALSPTAVAYANRAMANIKLRRQAYIFAEDDCTEALNLDDRYIKAYSRRATARKELGKVKESMEDAEFALRLEPSNQEIKKQFTDAKSLYEKKASGALRSTVQGTQKVGKSEEKVNGGSIPSSSRGTQKSGPAEVHHHKKGNEWQIPVKESLLMEEVDSRDTKARSRAQEQEGDGSKDSLGASNSLEQRDNRITKLEMKASIQQLASRATSRAMAEAAKNITPPTTAYQFEASWRAFSGDLALQARLLKAVSPHELPKIFKNALSSTLLMDIIKCLASFFTEDIDLVVSYMEHLTKVPRFDMIIMCLSSTNKDDIRKIWDKVFYSEATPIEQAEILDSLRSKFCLGQ 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr5601g00010 460 MobiDBLite consensus disorder prediction 266 287 - -
Mupr5601g00010 460 ProSiteProfiles TPR repeat profile. 87 120 IPR019734 GO:0005515
Mupr5601g00010 460 MobiDBLite consensus disorder prediction 18 67 - -
Mupr5601g00010 460 MobiDBLite consensus disorder prediction 52 67 - -
Mupr5601g00010 460 PANTHER OS05G0129900 PROTEIN 1 459 - -
Mupr5601g00010 460 Pfam Potential Monad-binding region of RPAP3 336 425 IPR025986 -
Mupr5601g00010 460 MobiDBLite consensus disorder prediction 212 243 - -
Mupr5601g00010 460 Gene3D Tetratricopeptide repeat domain 76 187 IPR011990 GO:0005515
Mupr5601g00010 460 MobiDBLite consensus disorder prediction 244 258 - -
Mupr5601g00010 460 SMART tpr_5 122 155 IPR019734 GO:0005515
Mupr5601g00010 460 SMART tpr_5 87 120 IPR019734 GO:0005515
Mupr5601g00010 460 SMART tpr_5 156 189 IPR019734 GO:0005515
Mupr5601g00010 460 ProSiteProfiles TPR repeat profile. 156 189 IPR019734 GO:0005515
Mupr5601g00010 460 MobiDBLite consensus disorder prediction 212 303 - -
Mupr5601g00010 460 SUPERFAMILY TPR-like 87 199 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr5601g00010 Mupr-Chr5601 79522 85090 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr5601g00010 91 213 U-box Gene Family AT3G07370 31.298 1.10e-07 51.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr5601g00010 K23002 - gmx:100784528 743.036