Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr5601g00006 ATGGAGACAAATGTGCCTTTTACTATTGTAATTTCATCGGTTTTCAAGATTCCATGTGGGATGTCCAAGGACGTCACTACTTTAAAAACTGCCTCCTTCAAGGTGCCATTGCGAGCTCAATGTGATTTCCGCGGGGATGCGGTTGGGATAGAGAGCCAACTGGCTCTGTGTTCCGACGGGGTTGTGTGGTTGGTGGTGGGCTCTCATTTAGGGAGAGCCTGTGGTCCTTGCTCTAGAGTTATTTTTTATGAGACAGACTTAAGTTCTGTGATTGACCCTCGAGGATGGGATGCTTGGAATTATACACAACAAACGAATGATTCATTCCTTTACCATAATGTGAATTTTATGAGTTGTATTTTCTACCGTGAGAGTTCGTGCACAGGGGCAGGTGCCAATACATCCCAACGCTTTCCTTGGACGAAGAACTTGACAAATTCAGACCTAAATGGACAATTTTCGATGTCAGTGTTCATCAACTCCGATGATTTGATCCCACAATTACCGCTCAAATAG 516 0.4419 METNVPFTIVISSVFKIPCGMSKDVTTLKTASFKVPLRAQCDFRGDAVGIESQLALCSDGVVWLVVGSHLGRACGPCSRVIFYETDLSSVIDPRGWDAWNYTQQTNDSFLYHNVNFMSCIFYRESSCTGAGANTSQRFPWTKNLTNSDLNGQFSMSVFINSDDLIPQLPLK 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr5601g00006 171 Gene3D - 58 171 IPR012334 -
Mupr5601g00006 171 SUPERFAMILY Pectin lyase-like 65 148 IPR011050 -
Mupr5601g00006 171 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 45 165 - -
Mupr5601g00006 171 Pfam Pectinesterase 67 161 IPR000070 GO:0030599|GO:0042545
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr5601g00006 Mupr-Chr5601 40660 45871 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr5601g00006 68 166 Carbohydrate Esterase AT3G60730 34.653 1.75e-11 59.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr5601g00006 - - gmx:100800737 108.227