Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr5601g00005 TCGATTGTGCCAATTAATCTTTGTTCTAGTCAGCAATTAATCATCTCTGAACATGGAATTACCTATCTGGAAAATCATTCTCTCACTTATTGTGTTCATTATTTGTTAGAGCAGTGGATTGTGGTGGCACGCAAGTTTCACGTACCATCCAAATCAGATTTCAAAACAATTCAAGCTGCCATTGACTCAGTAGCTACAGACAACAATCAATGGGTAAAAATTCACATAAACGCCGGCACATACACAGAGAAGGTTCAGATTCCATTTGAAAAGCCGTGCATCTTTTTGGAAGGCCAAGACAAAAATGCCACCATTATTACATACGATGACCACCAAAGAACAGATCTCAGCGCCACGTTCTCTTCGTATCCAAACAACGTTGTTGCAGCAGGCATTACTTTTAAGAACTCATTCGATATTGCGGCACCGGGGGATAGGAAT 441 0.4059 SIVPINLCSSQQLIISEHGITYLENHSLTYCVHYLLEQWIVVARKFHVPSKSDFKTIQAAIDSVATDNNQWVKIHINAGTYTEKVQIPFEKPCIFLEGQDKNATIITYDDHQRTDLSATFSSYPNNVVAAGITFKNSFDIAAPGDRN 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr5601g00005 147 SUPERFAMILY Pectin lyase-like 43 140 IPR011050 -
Mupr5601g00005 147 Gene3D - 38 146 IPR012334 -
Mupr5601g00005 147 Pfam Pectinesterase 51 137 IPR000070 GO:0030599|GO:0042545
Mupr5601g00005 147 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 40 136 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr5601g00005 Mupr-Chr5601 38633 40626 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr5601g00005 54 142 Carbohydrate Esterase AT2G19150 51.685 3.76e-27 100
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr5601g00005 - - gmx:100800737 151.754