Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr5596g00001 ATGAGCAAAAACTGGAAATTCAGTTGCTTCAGGGATCCTGAGAGAGTTCTGTTCCTTCTGGCGTTGTGTTTGTTGTTTCAGAACTTTAGTTTGTGCTTCTCTTTGAATGAAGAAGGTAAAGCTCTTTTGAAGTTCAAGCAGGGAATAGTAAAAGATCCTTTTGGTGCTTTGACAAATTGGGTTAATGATGAAATAGCAGTTAATCCTTGTAATTGGCTTGGAGTTGAGTGCTCTGATGGAAGAGTGGTGGTCTTGAATTTGAGAGACCTTTGTCTCGAAGGAAATCTAGCACCTCAGCTTGCAAACCTTGTTCACATAAAGTCCATAATTTTGCGGAACAATTCTTTTTATGGAATCATCCCTGAAGGAATTGCACAGTTGAATGAATTGGAGGTTTTGGATTTGGGCTTCAACAACTTCAGCGGACAGCTACCCACAGATCTTGGGAATAATATTTCACTAACAATTCTTTTGCTGGACAACAATGAACATCTTTGTGGTTTCTCTCCTGAAATCAATGAATTGAAGATGCTTTCTGAATATCAAGTAGATGAAAACCAACTAAGTAGTGCAGAAAGAGTGCAAGCTTGTACAAGAAGATCCATCAAACGGCATGTTGGCCAAAATAAAGGGGTTCGGAGGCTACTGCAAACTCGTGATAGTCCTTTTAATCGTGCGGCTATTTTTCCTGATAGTCCTGCTCCATCTCCTTCAGCTCCCCCACCTGCCTCAGCAACACCACCGCAGGTTCAGAAGCCACCTTCTGCTGACCGAAATCATTCTGCTTCTCCTTCTCCTTCTCCCCTGCCTGAACCAGCAGGCTCTGCACCACAATTTAAAAGTAACTCATCAAAGAAGCATTCACTTGTCATTTTGGCTGGAGTTACCGGTGGTGTTGTATTTATTTTCATTTCAATCATTGGCCTATATCTCTGTAAAACAAACAAGGTAGCTACCGTAAAACCTTGGGCCACAGGATTAAGTGGACAGCTTCAGAAGGCATTCGTTACAGGTGTGCCAAAGCTAAAGAGATCGGAGCTTGAAGCAGCATGTGAAGATTTTAGTAATGTAATTGGCATTTCATCCATTGGTACAGTGTACAAAGGGACTTTATCTAGTGGTGTTGAAATAGCTGTGGCATCTGTTGGAGTGACATCATCTAAAGATTGGTCAATGACTTTAGAAGCCCAATTTAGGAACAAGATAGATACATTATCAAAAGTGAACCACAAGAATTTTGTAAATCTTATTGGACATTGTGAAGAGGAGGAGCCTTTCACCAGAATGGTGGTTTTTGAATATGCCCCAAATGGAACACTCTTTGAGCATTTACACATAAAAGAAGCAGAACATTTGGATTGGGGAACAAGACTTAGAATTGCTGTGGGCATGGCTTACTGCCTACAACACATGCACCAGTTGGAGCCTCCTTTGGCCCTTGGCAACCTGAGTTCTTCAGCTGTCCAACTCACTGATGATTATGCTGCCAAAATCTCGGATTTGAGTTTCTTAAACGAAATAGCTTCAGCCGTGATAAAATCTCCTGCTAGAAAACACATTGACATGACACCAGCAAGTAACATCTACAGCTTTGGTGTTATATTATTCGAAATGGTAACTGGCAGACTCCCTTATTCAGTGGAAAATGATGGGTCACTTGATGACTGGGCTTCACACTATTTACAAGGGGACCAGCCCCTCAGAGATATGGTGGATCCAACTCTAGCATCCTTCCAAGAGGAACAGCTGGAACAAGTTGGTGCTTTGATTAAATCTTGTGTCCACCCTGATCAACAGCAGAGACCAACAATAAAAGAAGTTTGTTTGAGATTAAGAGAGATAACACATATAACACCTGAAGCAGCTGTTCCAAAACTTTCTCCACTTTGGTGGGCAGAGCTTGAGATTTCTTCTGTAAATGGAAGCTGA 1929 0.4163 MSKNWKFSCFRDPERVLFLLALCLLFQNFSLCFSLNEEGKALLKFKQGIVKDPFGALTNWVNDEIAVNPCNWLGVECSDGRVVVLNLRDLCLEGNLAPQLANLVHIKSIILRNNSFYGIIPEGIAQLNELEVLDLGFNNFSGQLPTDLGNNISLTILLLDNNEHLCGFSPEINELKMLSEYQVDENQLSSAERVQACTRRSIKRHVGQNKGVRRLLQTRDSPFNRAAIFPDSPAPSPSAPPPASATPPQVQKPPSADRNHSASPSPSPLPEPAGSAPQFKSNSSKKHSLVILAGVTGGVVFIFISIIGLYLCKTNKVATVKPWATGLSGQLQKAFVTGVPKLKRSELEAACEDFSNVIGISSIGTVYKGTLSSGVEIAVASVGVTSSKDWSMTLEAQFRNKIDTLSKVNHKNFVNLIGHCEEEEPFTRMVVFEYAPNGTLFEHLHIKEAEHLDWGTRLRIAVGMAYCLQHMHQLEPPLALGNLSSSAVQLTDDYAAKISDLSFLNEIASAVIKSPARKHIDMTPASNIYSFGVILFEMVTGRLPYSVENDGSLDDWASHYLQGDQPLRDMVDPTLASFQEEQLEQVGALIKSCVHPDQQQRPTIKEVCLRLREITHITPEAAVPKLSPLWWAELEISSVNGS 642
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr5596g00001 642 FunFam Inactive receptor-like serine/threonine-protein kinase 326 434 - -
Mupr5596g00001 642 SUPERFAMILY L domain-like 36 191 - -
Mupr5596g00001 642 Gene3D Phosphorylase Kinase; domain 1 324 434 - -
Mupr5596g00001 642 MobiDBLite consensus disorder prediction 250 264 - -
Mupr5596g00001 642 Gene3D Ribonuclease Inhibitor 34 214 IPR032675 -
Mupr5596g00001 642 ProSiteProfiles Protein kinase domain profile. 352 619 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr5596g00001 642 Pfam Protein tyrosine and serine/threonine kinase 355 609 IPR001245 GO:0004672|GO:0006468
Mupr5596g00001 642 SUPERFAMILY Protein kinase-like (PK-like) 335 611 IPR011009 -
Mupr5596g00001 642 MobiDBLite consensus disorder prediction 233 249 - -
Mupr5596g00001 642 MobiDBLite consensus disorder prediction 226 280 - -
Mupr5596g00001 642 Gene3D Transferase(Phosphotransferase) domain 1 435 623 - -
Mupr5596g00001 642 FunFam Nuclear pore complex protein NUP107 35 192 - -
Mupr5596g00001 642 Pfam Leucine rich repeat N-terminal domain 36 78 IPR013210 -
Mupr5596g00001 642 PANTHER PROTEIN MALE DISCOVERER 2 16 639 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr5596g00001 Mupr-Chr5596 2290 6422 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr5596g00001 18 611 Receptor kinase-like Gene Family AT5G16000 25.723 3.22e-44 166
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-2 Mupr5596g00001 PK_Tyr_Ser-Thr 2.1e-21 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr5596g00001 - - gmx:100784541 1059.28