Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr5581g00002 ATGACAACGGGAGTTGCTGAATTTGGGTGTTCTCGTGGTTGTGGAAATCAAATCAGTTTCATAACCCAAAGCCTCGAGGCTCTCGTCTCCGATCCAATTCTTCGTTCCTCCATGGAGGACGCATTTGCCAGATCTATTCCCGAGGTCCTTGATTTCTTTGGAGTGAACCCGACCAAGGGTTTATCTGATGCCGAGGTAGTACAACATAGTAGACTCCACGGTAAAAACGGAGCTCCTTTTTGGAAATTGGTTTTGAAGCAATTTGATGATTTGCTTGTAAAGATACTAATTGCAGCCGCTCTTATATCTTTTATTCTGGCGTTAATTAATGGAGAAACAGGCTTGATGGCATTTCTGGAGCCTTCTGTTATTCTGATGATATTGGCAGCAAATGCAGCGGTTGGAGTGATTACAGAAACAAATGCTGAAAAAGCTCTTGAGGAGCTACGTGCCTATCAAGCTGATGTGGCAACTGTTTTGCGCAATGGTTGTTTTTCCATACTTCCTGCAACTGAACTTGTTCCTGGGGATATTGTGGAAGTTTCTGTGGGGTGCAAAATTCCTGCTGATATGAGGATGATTGAGATGCTAAGCAATCAAGTTCGTGTTGATCAAGCTATTCTTACAGGTGAGAGCAGCTCCGTGGAGAAAGAGCTTAAGACAACCACAACAACAAATGCTGTATACCAAGACAAAACAAATATTCTCTTCTCGGGTACGATTATGGTTGCTGGTAGGGCAAGAGCTGTTGTGGTTGGAGTTGGTCCTAACACTGCCATGGGCAGCATACGTGATTCAATGTTGCGAACAGAGGATGAGGTGACACCATTGAAAAAGAAGCTGGACGAGTTTGGTTCCTTTTTGGCCAAGGTTATAGCAGGGATTTGTGTCTTGGTGTGGATTGTAAATATTGGTCACTTTCGTGATCCTTCTCATGGTGGTTTCTTGCATGGTGCAATTCATTATTTTAAGATTGCAGTTGCACTGGCAGTTGCTGCCATTCCTGAAGGGCTCCCTGCAGTTGTTACAACGTGTTTGGCTCTTGGAACAAAGCGTATGGCCAGGTTGAATGCCATTGTTCGCTCCTTGCCATCAGTTGAGACCTTGGGCTGCACCACTGTTATTTGCAGCGACAAAACTGGGACTCTAACTACCAATATGATGTCAGTTGCTAAGGTATGTGTTGTTGGATCTGCAAAACGAGGTCCTTTTGTTTCCGAATACAGTGTCAGCGGAACAACATATGCACCTGAAGGCATAATATTTGATAGTACAGGGGTGCAGCTTGATTTTCCTGCTCAATTGCCATGTCTTCTTCACATGGCAATGTGTTCTGCCCTTTGCAATGAATCAACCCTCCAGTATAATCCTGATAAAGGGAATTATGAAAAAATTGGCGAGTCAACTGAAGTAGCACTACGTGTCTTGGCAGAAAAGGTTGGTCTCCCTGGTTTCAATTCTATGCCATCAGCCTTGAACATGTTGACTAAGCATGAACGTGCTTCCTACTGTAACCATTATTGGGAGGAACAATTTAGAAAGATACATGTTTTGGAATTTTCTCGAGATCGGAAAATGATGAGTGTCCTTTGCAGCCGGAACCAGATGCATGTTTTGTTCTCAAAGGGTGCCCCAGAAAGTATAATATCTAGATGTACTACCATTCTGTGCAACGATGATGGTTCCATTGTGCCACTTACTGCTGATATTCGGGCAGAGCTGGACTCAAGGTTCCACAGGTTTGGAAAAGAAACATTAAGATGCCTTGCTTTGGCCCTGAAATGGATGCCCTCAGTTCAACAGTCATTGTCCTTTGATGATGAGAAAGATCTTACATTTATTGGGTTGGTTGGGATGCTGGATCCTCCAAGAGATGAAGTAAGAAATGCAATGCTTTCATGTATGACTGCTGGCATACGTGTTATAGTTGTCACTGGGGATAACAAGTCCACTGCTGAGTCACTTTGCCGCAAGATAGGTGCTTTTGACCAAATGATAGATTTTGCTGAACATTCTTACACTGCTTCTGAGTTTGAAGAACTTCCAGCACTGCAACAAACAATAGCATTGCAACGTATGACACTTTTTACCAGGGTTGAGCCTTCTCATAAAAGGATATTGGTTGAAGCATTACAGCACCAGAATGAAGTGGTTGCAATGACGGGTGACGGGGTTAATGATGCACCTGCACTGAAGAAGGCAGATATAGGAATTGCTATGGGTTCAGGGACAGCTGTCGCTAAGAGTGCTTCAGACATGGTGCTGGCTGATGACAATTTTGCCTCAATTGTTGCGGCTGTGGCAGAGGGAAGGGCTATATACAATAACACAAAACAGTTTATTCGATACATGATTTCTTCCAATATTGGTGAAGTAGTCTGTATATTTGTGGCTGCAGTCCTTGGAATACCAGATACCCTGGCCCCTGTCCAGTTGCTTTGGGTCAATTTGGTTACTGACGGATTGCCCGCCACTGCTATTGGCTTCAATAAACAAGACTCTGATGTGATGAGGGCTAAGCCTCGAAAGGTGAATGAAGCGGTTGTCACAGGTTGGCTCTTCTTTCGCTATTTGGTAATAGGAGCTTATGTTGGCCTTGCTACTGTTGCTGGTTTTATTTGGTGGTTTGTTTACTCGGATAGTGGCCCTAAACTTCCATATACAGAATTGATGAATTTTGATACTTGCCCAACCAGGGAGACGACTTATCCATGCAGTGTATTTGATGATCGACATCCATCTACTGTATCAATGACTGTGCTTGTTGTGGTTGAGATGTTCAATGCTTTGAACAATCTTAGTGAAAATCAATCTCTTCTGGTCATCCCTCCCTGGAGTAACTTGTGGCTTGTTGCTTCTATAATCCTAACTATGCTTCTTCACATACTAATCTTATATGTTCACCCACTGTCAGTTCTTTTCTCTGTAACGCCATTATCTTGGGCTGACTGGATAGTTGTCCTCTATCTTTCACTACCTGTTATAATTATTGATGAGGTGTTAAAGTTCTTCTCCAGAAATCCCATCGATTATGGTTCAGGAGGGCTGATTTACTTCCAAAAAAAGAAATACGTGATAAGTAAGATGTGGAGTACCATTTTAGCAAATTCTGCACTTGTGAAATCATATAGTTTCAGTGGTATCCTTGATTGA 3153 0.4291 MTTGVAEFGCSRGCGNQISFITQSLEALVSDPILRSSMEDAFARSIPEVLDFFGVNPTKGLSDAEVVQHSRLHGKNGAPFWKLVLKQFDDLLVKILIAAALISFILALINGETGLMAFLEPSVILMILAANAAVGVITETNAEKALEELRAYQADVATVLRNGCFSILPATELVPGDIVEVSVGCKIPADMRMIEMLSNQVRVDQAILTGESSSVEKELKTTTTTNAVYQDKTNILFSGTIMVAGRARAVVVGVGPNTAMGSIRDSMLRTEDEVTPLKKKLDEFGSFLAKVIAGICVLVWIVNIGHFRDPSHGGFLHGAIHYFKIAVALAVAAIPEGLPAVVTTCLALGTKRMARLNAIVRSLPSVETLGCTTVICSDKTGTLTTNMMSVAKVCVVGSAKRGPFVSEYSVSGTTYAPEGIIFDSTGVQLDFPAQLPCLLHMAMCSALCNESTLQYNPDKGNYEKIGESTEVALRVLAEKVGLPGFNSMPSALNMLTKHERASYCNHYWEEQFRKIHVLEFSRDRKMMSVLCSRNQMHVLFSKGAPESIISRCTTILCNDDGSIVPLTADIRAELDSRFHRFGKETLRCLALALKWMPSVQQSLSFDDEKDLTFIGLVGMLDPPRDEVRNAMLSCMTAGIRVIVVTGDNKSTAESLCRKIGAFDQMIDFAEHSYTASEFEELPALQQTIALQRMTLFTRVEPSHKRILVEALQHQNEVVAMTGDGVNDAPALKKADIGIAMGSGTAVAKSASDMVLADDNFASIVAAVAEGRAIYNNTKQFIRYMISSNIGEVVCIFVAAVLGIPDTLAPVQLLWVNLVTDGLPATAIGFNKQDSDVMRAKPRKVNEAVVTGWLFFRYLVIGAYVGLATVAGFIWWFVYSDSGPKLPYTELMNFDTCPTRETTYPCSVFDDRHPSTVSMTVLVVVEMFNALNNLSENQSLLVIPPWSNLWLVASIILTMLLHILILYVHPLSVLFSVTPLSWADWIVVLYLSLPVIIIDEVLKFFSRNPIDYGSGGLIYFQKKKYVISKMWSTILANSALVKSYSFSGILD 1050
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr5581g00002 1050 PANTHER CALCIUM-TRANSPORTING ATPASE 45 1007 - -
Mupr5581g00002 1050 SMART Cation_ATPase_N_a_2 40 108 IPR004014 -
Mupr5581g00002 1050 NCBIfam HAD-IC family P-type ATPase 123 401 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Mupr5581g00002 1050 NCBIfam HAD-IC family P-type ATPase 691 806 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Mupr5581g00002 1050 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 383 619 IPR023299 GO:0000166
Mupr5581g00002 1050 PRINTS P-type cation-transporting ATPase superfamily signature 744 756 - -
Mupr5581g00002 1050 PRINTS P-type cation-transporting ATPase superfamily signature 376 390 - -
Mupr5581g00002 1050 PRINTS P-type cation-transporting ATPase superfamily signature 721 740 - -
Mupr5581g00002 1050 PRINTS P-type cation-transporting ATPase superfamily signature 204 218 - -
Mupr5581g00002 1050 PRINTS P-type cation-transporting ATPase superfamily signature 615 626 - -
Mupr5581g00002 1050 PRINTS P-type cation-transporting ATPase superfamily signature 637 647 - -
Mupr5581g00002 1050 FunFam Calcium-transporting ATPase 143 268 - -
Mupr5581g00002 1050 Pfam E1-E2 ATPase 153 355 - -
Mupr5581g00002 1050 Pfam haloacid dehalogenase-like hydrolase 613 735 - -
Mupr5581g00002 1050 NCBIfam calcium-translocating P-type ATPase, SERCA-type 84 876 IPR005782 GO:0005388|GO:0006816|GO:0016020
Mupr5581g00002 1050 Gene3D - 86 1006 - -
Mupr5581g00002 1050 CDD P-type_ATPase_SERCA 42 1006 - -
Mupr5581g00002 1050 Gene3D - 386 622 IPR023299 GO:0000166
Mupr5581g00002 1050 Pfam Cation transporter/ATPase, N-terminus 45 103 IPR004014 -
Mupr5581g00002 1050 ProSitePatterns E1-E2 ATPases phosphorylation site. 378 384 IPR018303 -
Mupr5581g00002 1050 FunFam Sarcoplasmic/endoplasmic reticulum calcium ATPase 1 717 1011 - -
Mupr5581g00002 1050 SUPERFAMILY Calcium ATPase, transmembrane domain M 39 1006 IPR023298 -
Mupr5581g00002 1050 SFLD p-type atpase 357 773 IPR044492 -
Mupr5581g00002 1050 SUPERFAMILY HAD-like 608 769 IPR036412 -
Mupr5581g00002 1050 Pfam Cation transport ATPase (P-type) 446 555 - -
Mupr5581g00002 1050 SUPERFAMILY Calcium ATPase, transduction domain A 155 266 IPR008250 -
Mupr5581g00002 1050 Gene3D - 373 765 IPR023214 -
Mupr5581g00002 1050 FunFam Calcium-transporting ATPase 386 622 - -
Mupr5581g00002 1050 Gene3D - 59 268 - -
Mupr5581g00002 1050 Pfam Cation transporting ATPase, C-terminus 805 1004 IPR006068 -
Mupr5581g00002 1050 FunFam Calcium-transporting ATPase, putative 243 372 - -
Mupr5581g00002 1050 FunFam Sodium/potassium-transporting ATPase subunit alpha 614 760 - -
Mupr5581g00002 1050 Coils Coil 142 162 - -
Mupr5581g00002 1050 PRINTS H+-transporting ATPase (proton pump) signature 693 709 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Mupr5581g00002 1050 PRINTS H+-transporting ATPase (proton pump) signature 752 777 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Mupr5581g00002 1050 PRINTS H+-transporting ATPase (proton pump) signature 574 592 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Mupr5581g00002 1050 PRINTS H+-transporting ATPase (proton pump) signature 721 737 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Mupr5581g00002 1050 SFLD C1.7: P-type atpase like 357 773 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr5581g00002 Mupr-Chr5581 31052 57517 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr5581g00002 38 1007 Primary Pumps ATPases(2) AT1G10130 84.939 0.0 1712
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr5581g00002 K05853 - gmx:100783509 1825.83