Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr557g00005 ATGAGTGAAGGGCATGATAGTGGTTGTGAGTCATGGGTATACCCTGCCGCTGTTCCCACACCTCCCACATCACTGAGATCATCATCACCAGCTTCTTCCGCCACAAGTCTTAGATCATTCCACTACTTTGATACCCTTCGTCCCATGGCGGCTTCTCCACCAAATCTTTCCAACAATACTTGTTTCCTTCCTAATTCCGAACCTCTCTTCCTCTCTTCTTCCTCTTATCCCTTCCTCGGTTCAAGATCCATGGTGAGTTTCGAAGGAGAAGGAGGGAAGGGGTCCTTCTTCCGCGCATTTGACATGGACGATAATGGGGAGGACTGCATGGAAGACTACTTTCACCAACCCGAGAAGAAGCGTCGTCTCTCTGCCAATCAGGTTCTTTTTCTCGAGAAGAGCTTCGACCAGGACAACAAACTGGAACCCGACAGGAAAACCAAGCTCGCCAAAGACCTCGGTTTGCAGCCCCGACAAGTCGCTATTTGGTTTCAGAACCGTCGAGCTCGCTGGAAGACCAAGCAGATGGAGAAGGATTACGAGACTCTGCATCATAGTTACCAGACTCTCAGGGCCAACTACGACAACCTCCTCAAGGAGAAAGACAACCTTAAAGCCCAGGTGGCGAGCCTGACGGAAAAGGTGGTTGCAAGAGGGAAACAAGAGGGTGAAGAAGCAAAAAGGGGTTCTTTAATGGAATCAGTTTCGGAGGATATTAGTACGGGCAGGAGTGACATTATGGATTCGGAAAGCCCACACTCGGCGCTGCTGGAGCCTGCTCATCAATCGGAACTGTCACAAGAACAACAACAACATAACCCCACCAACCCTCTCTACCCTTCTTCCTACCTCTTTCCCAAACTCGAAGACGTCGATTACTCTCACCCACCTCACACTTCTTCTAATTTTGGATTTCCAGACGAAGATCACGCCCTTTGGACCTGGGCATACTAG 954 0.4979 MSEGHDSGCESWVYPAAVPTPPTSLRSSSPASSATSLRSFHYFDTLRPMAASPPNLSNNTCFLPNSEPLFLSSSSYPFLGSRSMVSFEGEGGKGSFFRAFDMDDNGEDCMEDYFHQPEKKRRLSANQVLFLEKSFDQDNKLEPDRKTKLAKDLGLQPRQVAIWFQNRRARWKTKQMEKDYETLHHSYQTLRANYDNLLKEKDNLKAQVASLTEKVVARGKQEGEEAKRGSLMESVSEDISTGRSDIMDSESPHSALLEPAHQSELSQEQQQHNPTNPLYPSSYLFPKLEDVDYSHPPHTSSNFGFPDEDHALWTWAY 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr557g00005 317 Gene3D - 113 183 - -
Mupr557g00005 317 MobiDBLite consensus disorder prediction 234 248 - -
Mupr557g00005 317 MobiDBLite consensus disorder prediction 260 280 - -
Mupr557g00005 317 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN 106 267 IPR045224 GO:0003700
Mupr557g00005 317 Pfam Homeobox associated leucine zipper 174 215 IPR003106 GO:0006355|GO:0043565
Mupr557g00005 317 PRINTS Lambda-repressor HTH signature 145 154 IPR000047 GO:0003677
Mupr557g00005 317 PRINTS Lambda-repressor HTH signature 154 170 IPR000047 GO:0003677
Mupr557g00005 317 ProSiteProfiles 'Homeobox' domain profile. 114 174 IPR001356 GO:0003677
Mupr557g00005 317 SMART HOX_1 117 178 IPR001356 GO:0003677
Mupr557g00005 317 CDD homeodomain 119 175 IPR001356 GO:0003677
Mupr557g00005 317 ProSitePatterns 'Homeobox' domain signature. 149 172 IPR017970 GO:0000981|GO:0006355
Mupr557g00005 317 Coils Coil 187 214 - -
Mupr557g00005 317 SUPERFAMILY Homeodomain-like 105 176 IPR009057 -
Mupr557g00005 317 FunFam homeobox-leucine zipper protein ATHB-6-like 122 168 - -
Mupr557g00005 317 Pfam Homeodomain 119 172 IPR001356 GO:0003677
Mupr557g00005 317 MobiDBLite consensus disorder prediction 220 281 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr557g00005 Mupr-Chr557 41610 42732 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr557g00005 58 233 Homeobox Transcription Factor Family AT3G01470 47.159 1.11e-43 149
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Mupr557g00005 Homeodomain 1.6e-16 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr557g00005 - - gmx:100799054 335.88