Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr5579g00001 ATGTATGCAGAGACTGGTCTTCTCTTCCCATATTTGCACAACTTCTCTCAAGAGCTTCATCAGCTTGAGGAGTACTGCAAAACCCACAAGTTCAATGCTTCAATGGATGACCTTGTTCAGTCTTCTGCCATGTCAGAGTATGATTTGGCAGCAGAGGGAGATCTGTTCAAAGCTCCTGAACCTATTATTGAAGAGCCAATCATGGACCTGGATCCCATGACAGCAGCCATTTCGATGATATCTTGTGGGGAAGATGTCTCCTCACAGGGACTAAAATCCACAGATATTGATATTCTTGAAAATGATCAGTTTCTGAGTGAGGTATTCTATGAATGCAAAAAGGATCTCTTAGAAAAGGCAGCATTAGAGTCACCACTATCTGAGATTCTGGAAATCAAGGTAGGTCCTGTTCTGAACATTGATGAGAACTCAATTCAAGAAAACAAGCTACTTCCTGACATGCAATTAGCAAAGAGTGTCAGCTCAGGAAGTTTGAGCTCAATGGACTGGATGCGTGGAGCTGCAATGAAGCCTGCTTTCATTGATATCCCTGCAATTGATTTCAATGCAGTTTATGGCATGAGGAGATCATTTAGTGAAGGAGATATAAAGACTCTTGGTAATGGTAACATGAACATCGTCCAATCACCCCAGGAGAGGCCCTTTCTTATCAGTAACTGCACCAGTGAGGAACGCTTCCAAAAGCTCTCTAGATACAGGAATAAGAGGACAAAGAGGAATTTTGGGAGGAAAATCAAGTATGCTTGCAGGAAGGCTCTCGCTGATAGTCAACCAAGAATCCGTGGAAGATTTGCAAAGACTGAAGAATCTGAGGGCAAGAGGGAATGA 849 0.4276 MYAETGLLFPYLHNFSQELHQLEEYCKTHKFNASMDDLVQSSAMSEYDLAAEGDLFKAPEPIIEEPIMDLDPMTAAISMISCGEDVSSQGLKSTDIDILENDQFLSEVFYECKKDLLEKAALESPLSEILEIKVGPVLNIDENSIQENKLLPDMQLAKSVSSGSLSSMDWMRGAAMKPAFIDIPAIDFNAVYGMRRSFSEGDIKTLGNGNMNIVQSPQERPFLISNCTSEERFQKLSRYRNKRTKRNFGRKIKYACRKALADSQPRIRGRFAKTEESEGKRE 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr5579g00001 282 ProSiteProfiles CCT domain profile. 232 274 IPR010402 GO:0005515
Mupr5579g00001 282 Pfam CCT motif 232 274 IPR010402 GO:0005515
Mupr5579g00001 282 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 4 146 275 IPR045281 GO:0009909
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr5579g00001 Mupr-Chr5579 18397 24332 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr5579g00001 228 278 C2C2-CO-like Transcription Factor Family AT5G57660 52.941 4.28e-10 57.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Mupr5579g00001 CCT 9.7e-17 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr5579g00001 - - gmx:100814332 504.597