Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr5573g00002 ATGGACTTCCATCTGAAGCAATGGAGAAACCAGCATGAGTCAGAGGAACAACATTCTACAAAGATGCCAAAACTTCTCCCTGAATCTCATCAAGAGCCACAAACTCAATCATCTGCCTCTGCACTCCCTTTGTTTGTACCTGAACCCAACAGCAAAGTCAGCACCTTGTCAGATTCAACATTAGCTACTACCACTAACAGATTTCCCAAAAAAAGAAATTTGCTTCCACCACAACCCTTCTTTCTTTGGCTCTTACGTTTTCTCTCTTTTTTTCCCTTTCTGGGTTGGTCTCCTCTTTATTACACCTGCTCAGGGATGGGGAGCTACTTCAGCTTGTCTCAGTGGCAGGAGCTTGAGTTGCAGGCTTTGATATTCAGGTACATGTTAGCTGGTGCTGCTGTTCCTCCTGAACTCCTTCAACCAATCAGGAAAAGCCTTCTTCATTCCCCTCACTATTTCCTCCATCACCCTCTCCAACATTACCAACCTGCTTCTGCTTTATTGCAATCAGGGTATTGGGGTAGAGGAGGCATGGATCCGGAGCCGGGGCGATGCCGGAGAACCGACGGAAAAAAGTGGCGGTGCTCGAGGGACGTGGTGGCGGGGCAAAAGTACTGTGAACGCCACATGCATCGTGGAAGAAACCGTTCAAGAAAGCCTGTGGAACTACCCACACCAAGTAGCGCTTGTGGTGCTGGATCTCTAGCTCCTTCATCTTCCATTTCTTCGCCGCCTCTAGCTACTGCTTCACTCAAATCCCCCTTTGATCTTCTTCATCTTAATGAACGTTCCTCTGGGACCAAGAATGAAGACAAGAGCCTGTTTGAAAACGAAGATCATGTGGGTGGGGATGGCAGATCAGGTGGCCATATGCTGAGGCATTTCTTTGATGATTGGCCACGATCACTGCAAGACTCTGACAACGTTGAAAACAATGCTTCCCGGATCAACTCGCCCACATGCCTCTCTATTTCAATGCCTGGAAATACTTCCTCTGATGTCTCGTTGAAATTGTCCACGGGCTATGGGGAGGACCCGGGCCCAAGAAATGGGAATCTTGACCTCGAGCCGGAGCAACTGCAGTTGAATTGGGCCGGAGGATGGGCCTCGGCTAATCAAGTGGCTTCAATGGGTGGCCCACTTGCCGAGGCACTCAGATCATCTACTTCAACCTCGTCTCCCACTAGTGTTTTGCATCACTTGCCTCGTGGTTCTGGATCTGAGACCAGCTTCATTAGCACCTAA 1245 0.4916 MDFHLKQWRNQHESEEQHSTKMPKLLPESHQEPQTQSSASALPLFVPEPNSKVSTLSDSTLATTTNRFPKKRNLLPPQPFFLWLLRFLSFFPFLGWSPLYYTCSGMGSYFSLSQWQELELQALIFRYMLAGAAVPPELLQPIRKSLLHSPHYFLHHPLQHYQPASALLQSGYWGRGGMDPEPGRCRRTDGKKWRCSRDVVAGQKYCERHMHRGRNRSRKPVELPTPSSACGAGSLAPSSSISSPPLATASLKSPFDLLHLNERSSGTKNEDKSLFENEDHVGGDGRSGGHMLRHFFDDWPRSLQDSDNVENNASRINSPTCLSISMPGNTSSDVSLKLSTGYGEDPGPRNGNLDLEPEQLQLNWAGGWASANQVASMGGPLAEALRSSTSTSSPTSVLHHLPRGSGSETSFIST 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr5573g00002 414 MobiDBLite consensus disorder prediction 1 33 - -
Mupr5573g00002 414 ProSiteProfiles QLQ domain profile. 109 144 IPR014978 GO:0005524|GO:0005634|GO:0006355
Mupr5573g00002 414 MobiDBLite consensus disorder prediction 265 286 - -
Mupr5573g00002 414 ProSiteProfiles WRC domain profile. 179 223 IPR014977 -
Mupr5573g00002 414 MobiDBLite consensus disorder prediction 210 244 - -
Mupr5573g00002 414 Pfam WRC 180 222 IPR014977 -
Mupr5573g00002 414 SMART QLQ_2 108 144 IPR014978 GO:0005524|GO:0005634|GO:0006355
Mupr5573g00002 414 MobiDBLite consensus disorder prediction 1 25 - -
Mupr5573g00002 414 PANTHER GROWTH-REGULATING FACTOR 5 46 332 IPR031137 GO:0005634|GO:0006351|GO:0032502
Mupr5573g00002 414 MobiDBLite consensus disorder prediction 385 414 - -
Mupr5573g00002 414 Pfam QLQ 110 143 IPR014978 GO:0005524|GO:0005634|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr5573g00002 Mupr-Chr5573 20612 23404 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr5573g00002 1 401 GRF Transcription Factor Family AT2G36400 45.414 5.39e-93 283
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRF Mupr5573g00002 WRC 2.6e-22 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr5573g00002 - - gmx:100814842 595.119