Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr5554g00004 ATGGCTCACGAAAGAGCATACCATTGGTTTGTTATGCTCTTTGTGTTGGCCATTTGTGTTGTGCCATCGTGGGGAGACACAAATGCTGAAATTTTGATAAGGTTCAAAAAATCATTGTCCAATGATGGTGCATTAAGCAACTGGGGGAACGAGTCTAGTTTATGCAAATGGGCTGGTTTGTTATGCCGTAGGGACCAAACATTTTATGGCTTGAGACTAGAGAACATGGGACTAGGGGGGAAGGTTGATGTAGAAACCTTGTTGGAATTGCCAACTTTGGTGAGCTTTAGTGTCATTAACAACACGTTTGAGGGTCCAATGCCTCAGTTTAAAAGGCTTGTGAAGTTAAGGGCGTTGTTTCTGTCCAATAACAAGTTCTCTGGTGAAATTCCTGATGATGCTTTTGAGGGCATGAGAAATCTGAAGAGGGTGTTCTTGGCAGAAAATGGGTTCACGGGTCTTGTTCCTACGTCACTTGCTAACTTGCCTAGACTTTGGGATTTGGACTTGAGTGGGAATAGTTTTGGAGGAAACGTGCCAAGATTTCAACAGAACGATTTTAGACTGTTTAATTTGTCGTATAACCAATTGGAGGGTCCAATACCAGAAAGCTTAAGCAACATGGATTCAAGTTCATTTGCTGGCAACACAGGCCTATGTGGAAAACCTATGAGCCTCTGCAATAAGCTTGGCATGAACCCTATTCCCAACCCCAACGACTCTAGATCAATGGTTCCAAACCCTGCTTCTCCACCTCCAGGAAAGGAAAAGAAACACCACATCCTTGTAACTGTCATTATAGTTGTGGCAGTGGTTGTCTTTGCTTCATTAGTAGCACTTCTATTTATCATTAACCACAAAAAGAAAAGCTTGCAACCAGTTGGCAAGCAGGCAAATTCCCAGAACAGTGAAGGCTTCAAGGAGTCACAATCCATTGATATGACAGGTGATTTCAAGAAGGGTGGTGATGGGGAGTTGAACTTTGTTAGGGAAGACAGAGGGGGGTTTGATTTGCAAGACCTGCTTAGAGCCTCAGCTGTGATTCTTGGCAGTGGCAGTTTTGGTTCCACCTACAAGGCCATGATTTTGAATGGACCGTCTGTGGTTGTGAAGAGGTTCAGACACATGAACAATGTTGGGAAACAGGAGTTCTTTGAGCACATGCAAAGGCTTGGAAGTTTGACACACCCTAATCTTCTCCCTCTTGCAGCATTCTACTATAGGAAAGAAGATAAGTTTTTGGTTTATGACTTTGGTGAAAATGGCAGCTTGGCCAGTCATCTACATGGTAGAAATGGTTCTGTGCTAACCTGGTCAACCCGTTTGAAGATCATAAAAGGGGTGGCTAGGGGCCTAGCCTACCTCAATGAGAACTTCCCTGGACAAAGCCCCCCACATGGTCATCTGAAGTCCTCCAATGTGGTGCTGGACCATTCATTTGAGCCACAGTTGACTGAGTATGGCCTTGTGCCAGTGATGAGCAGGAGCCATGCTCAGCAGTTCATGGCAGCATACAAGGCTCCAGAGGTGAGCCAGTCAGGCAGGCCAAATGAGAAGAGTGATGTGTGGTGTTTGGGGATCCTCATTCTGGAGCTGCTGACAGGGAAGTTCCCAGCAAACTATCTGAGGCATGGGAAGGGGGGGAATAACCACAATGCTGACTTGGCAACATGGGTGGACTCAGTTGTGAGGGAGGAGTGGACTGGTGAGGTGTTTGATAAGGACATCATGGGAACCAGGAATGGGGAGGGGGAGATGCTGAAGCTGCTCAGGGTTGGGATGCATTGCTGCAAATGGAGTGTGGAGAGTAGGTGGGATTGGAGGGAGGCAGTGGCCAAGATTGAGGAGTTGAAGGAGAGGGATAGTGAGGATGACTCTTCTTATGTCAGTGAAGGGGACTTGTATTCAAGGACTATGACTGAAGATGAGTTCTCTTTATCTGTCATTAATGGATGA 1956 0.4601 MAHERAYHWFVMLFVLAICVVPSWGDTNAEILIRFKKSLSNDGALSNWGNESSLCKWAGLLCRRDQTFYGLRLENMGLGGKVDVETLLELPTLVSFSVINNTFEGPMPQFKRLVKLRALFLSNNKFSGEIPDDAFEGMRNLKRVFLAENGFTGLVPTSLANLPRLWDLDLSGNSFGGNVPRFQQNDFRLFNLSYNQLEGPIPESLSNMDSSSFAGNTGLCGKPMSLCNKLGMNPIPNPNDSRSMVPNPASPPPGKEKKHHILVTVIIVVAVVVFASLVALLFIINHKKKSLQPVGKQANSQNSEGFKESQSIDMTGDFKKGGDGELNFVREDRGGFDLQDLLRASAVILGSGSFGSTYKAMILNGPSVVVKRFRHMNNVGKQEFFEHMQRLGSLTHPNLLPLAAFYYRKEDKFLVYDFGENGSLASHLHGRNGSVLTWSTRLKIIKGVARGLAYLNENFPGQSPPHGHLKSSNVVLDHSFEPQLTEYGLVPVMSRSHAQQFMAAYKAPEVSQSGRPNEKSDVWCLGILILELLTGKFPANYLRHGKGGNNHNADLATWVDSVVREEWTGEVFDKDIMGTRNGEGEMLKLLRVGMHCCKWSVESRWDWREAVAKIEELKERDSEDDSSYVSEGDLYSRTMTEDEFSLSVING 651
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr5554g00004 651 Gene3D Ribonuclease Inhibitor 187 228 IPR032675 -
Mupr5554g00004 651 Gene3D Transferase(Phosphotransferase) domain 1 420 638 - -
Mupr5554g00004 651 ProSiteProfiles Protein kinase domain profile. 343 617 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr5554g00004 651 SMART LRR_typ_2 113 137 IPR003591 -
Mupr5554g00004 651 SMART LRR_typ_2 138 161 IPR003591 -
Mupr5554g00004 651 SMART LRR_typ_2 162 189 IPR003591 -
Mupr5554g00004 651 ProSitePatterns Protein kinases ATP-binding region signature. 349 371 IPR017441 GO:0005524
Mupr5554g00004 651 FunFam Pollen receptor-like kinase 1 420 628 - -
Mupr5554g00004 651 Pfam Leucine rich repeat N-terminal domain 29 62 IPR013210 -
Mupr5554g00004 651 SUPERFAMILY Protein kinase-like (PK-like) 348 616 IPR011009 -
Mupr5554g00004 651 Gene3D Ribonuclease Inhibitor 25 186 IPR032675 -
Mupr5554g00004 651 Gene3D Phosphorylase Kinase; domain 1 318 418 - -
Mupr5554g00004 651 SUPERFAMILY L domain-like 48 209 - -
Mupr5554g00004 651 Pfam Leucine rich repeat 115 174 IPR001611 GO:0005515
Mupr5554g00004 651 MobiDBLite consensus disorder prediction 293 310 - -
Mupr5554g00004 651 MobiDBLite consensus disorder prediction 293 315 - -
Mupr5554g00004 651 FunFam Nuclear pore complex protein NUP107 25 181 - -
Mupr5554g00004 651 Pfam Protein kinase domain 348 555 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr5554g00004 651 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 13 624 IPR046959 -
Mupr5554g00004 651 MobiDBLite consensus disorder prediction 235 256 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr5554g00004 Mupr-Chr5554 29024 32469 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr5554g00004 12 633 Receptor kinase-like Gene Family AT5G35390 45.231 0.0 535
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Mupr5554g00004 Pkinase 6.4e-27 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr5554g00004 - - gmx:100781593 1021.92