Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr5550g00004 GCTAAAGTGGATCGAAAACATGGAAAGAGGTCACTTCCTTTGGAAGAAGAAGAGGAAGAGAATCCGTTTCCGGTTTATTCCAATCGGTCCCAGCAAGACATGTCGGCTGTGGTATCGGCTCTTGTGCAAGTCATTGGTGGCAATCCAGTGCACCAAGATCCAATAACGGTGTCTCACTCCACTGCTGTTGGAAATGATTCCAATGAAAAATCACAACCTCCACAACATCAAGGAAACGCAAGAAGAGAGTATAGAGGAGTACGGCAGCGACCTTGGGGCAAGTGGGCGGCGGAGATTCGCGACCCAAAGAAAGCAGCCCGAGTTTGGTTGGGAACTTTTCAGACTGCTGAGGCTGCTGCTCTTGCTTACGACGAAGCCGCTCTCAGATTCAAAGGAAGCAAAGCCAAACTTAATTTTCCAGAAAGGGTTCAATTCTCACCCCAATTTGGTTACCTCACTAATCGCACTCACCACAATAATAATCATCAACAACGCTTCTCGCTAGGTTCCTCTTCCACTCCTTCTCAACATCCTCACGTCTTTGTTTCCTCAGCTCTACCTTCGTCTTCATCCTCATCATCTTCGGGACTATCGAGGCCTCCACAACAACAACAGCTTCTAACGTTTTCGATGCAATCTCCACGTTCTTCTTCTACTTCGGAGCCTCCTAGGAAACGGACAAGTGATTTCGATGGCAAACGT 702 0.4772 AKVDRKHGKRSLPLEEEEEENPFPVYSNRSQQDMSAVVSALVQVIGGNPVHQDPITVSHSTAVGNDSNEKSQPPQHQGNARREYRGVRQRPWGKWAAEIRDPKKAARVWLGTFQTAEAAALAYDEAALRFKGSKAKLNFPERVQFSPQFGYLTNRTHHNNNHQQRFSLGSSSTPSQHPHVFVSSALPSSSSSSSSGLSRPPQQQQLLTFSMQSPRSSSTSEPPRKRTSDFDGKR 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr5550g00004 234 PRINTS Ethylene responsive element binding protein signature 84 95 IPR001471 GO:0003700|GO:0006355
Mupr5550g00004 234 PRINTS Ethylene responsive element binding protein signature 106 122 IPR001471 GO:0003700|GO:0006355
Mupr5550g00004 234 SUPERFAMILY DNA-binding domain 84 141 IPR016177 GO:0003677
Mupr5550g00004 234 ProSiteProfiles AP2/ERF domain profile. 83 140 IPR001471 GO:0003700|GO:0006355
Mupr5550g00004 234 MobiDBLite consensus disorder prediction 153 221 - -
Mupr5550g00004 234 CDD AP2 84 141 IPR001471 GO:0003700|GO:0006355
Mupr5550g00004 234 MobiDBLite consensus disorder prediction 49 87 - -
Mupr5550g00004 234 Gene3D AP2/ERF domain 82 142 IPR036955 GO:0003700|GO:0006355
Mupr5550g00004 234 FunFam Ethylene-responsive transcription factor 2 82 141 - -
Mupr5550g00004 234 PANTHER DNA-BINDING DOMAIN 48 205 IPR044808 GO:0003700|GO:0009873
Mupr5550g00004 234 MobiDBLite consensus disorder prediction 153 234 - -
Mupr5550g00004 234 MobiDBLite consensus disorder prediction 53 78 - -
Mupr5550g00004 234 Pfam AP2 domain 84 132 IPR001471 GO:0003700|GO:0006355
Mupr5550g00004 234 MobiDBLite consensus disorder prediction 1 30 - -
Mupr5550g00004 234 SMART rav1_2 83 146 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr5550g00004 Mupr-Chr5550 30501 34468 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr5550g00004 21 161 AP2-EREBP Transcription Factor Family AT5G61890 60.811 1.07e-49 161
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Mupr5550g00004 AP2 1.6e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr5550g00004 - - gmx:100793410 260.766