Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr5540g00003 ATGAGCACAAGCAGAGCCGAAGCGGAACGCTTGCTCGCGATCGGCGAGAAGCTGTTACAGAGTCGCGACCTGAGCGGCTCAAAGGACTTTGCCATCCTCGCCCAGGAAGCCGAGCTGCTCCTCGAGGGCTCCGACCAGATCCTCGCTATCGTCGACGTGCTCCTCGCGGCGGAGAAGCCAATCAACAACGACCACCTCGATTGGTACGCTATTCTTCAGTTGGATCGCACGTGCCAGGACCTCGATCTCATAAGGAAACAGTATCGCAGGCTCGGCCTTCTCCTTCACCCCGATAAGAACCCGTTCTCACTCGCGGACCACGCGTTTAAGCTCGTCGCGGATGCCTGGGCCGTGCTATCGGACCCGGTCCAGAAGGCCCTATATGATAGGGACGTTGTTGCCGGTTCGGCCCAATCCGCGAGTTTCTGGACCGCGTGTCCGTACTGTTATTTTCTCTACGAGTACCCTGCGCTTTGCGAGGGTTGTTGCTTGAGGTGCCAGAATCGGAACTGCAAGAGGTCGTTCCACGGGCTCTCCATTCCGTCTCTGCCGCCACTCGTGCCGGGTCGTGAGGCCTATTATTGTAACTGGGGGTTCTTTCCCATGGGCTTTGTCTTTGGAGGGCCTGGCCCTGGCCCGGCGGAGAATAATCCCAATGTTATTCAACCGGTGGCGATTTCGAATGGGGTTGACTCGGAATTGGGTTCTGCTTCGCTGAAGCGGAAGCGTGGAAGGCAGCGAAAAGTCGTCAATAATATTCCTGATATGGTTCATACTCTCCCAGCTTATAACTCATGTGAGCACGAATCGAACAAAATATTGGTGTTACAAGACCTCATGCATCCTATTCAATCAACCAAGCTAGATCTCATCGGTCCTGAGCCACCCCACCCAGCACACGTACAAGCACTTACAAATACAGGATTTCCATATTCTGCGTTTCGGCTTGAGGTATTGATGTGGGGCTCGATGTCTCAGCAAGATTTGTCAAATTTCAAGTTCTACTTCGAACTCGTATGCCAATGTTCCATCAATCTTGGCTTCTTCCTCCTCATTTGTAACAATGGACTGAGTTGA 1077 0.532 MSTSRAEAERLLAIGEKLLQSRDLSGSKDFAILAQEAELLLEGSDQILAIVDVLLAAEKPINNDHLDWYAILQLDRTCQDLDLIRKQYRRLGLLLHPDKNPFSLADHAFKLVADAWAVLSDPVQKALYDRDVVAGSAQSASFWTACPYCYFLYEYPALCEGCCLRCQNRNCKRSFHGLSIPSLPPLVPGREAYYCNWGFFPMGFVFGGPGPGPAENNPNVIQPVAISNGVDSELGSASLKRKRGRQRKVVNNIPDMVHTLPAYNSCEHESNKILVLQDLMHPIQSTKLDLIGPEPPHPAHVQALTNTGFPYSAFRLEVLMWGSMSQQDLSNFKFYFELVCQCSINLGFFLLICNNGLS 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr5540g00003 358 ProSiteProfiles dnaJ domain profile. 67 132 IPR001623 -
Mupr5540g00003 358 PRINTS DnaJ domain signature 69 87 IPR001623 -
Mupr5540g00003 358 PRINTS DnaJ domain signature 104 124 IPR001623 -
Mupr5540g00003 358 PRINTS DnaJ domain signature 88 103 IPR001623 -
Mupr5540g00003 358 ProSitePatterns Nt-dnaJ domain signature. 109 128 IPR018253 -
Mupr5540g00003 358 Gene3D DnaJ domain 56 146 IPR036869 -
Mupr5540g00003 358 SMART dnaj_3 66 124 IPR001623 -
Mupr5540g00003 358 Pfam DnaJ domain 67 129 IPR001623 -
Mupr5540g00003 358 SUPERFAMILY Chaperone J-domain 64 144 IPR036869 -
Mupr5540g00003 358 CDD DnaJ 67 121 IPR001623 -
Mupr5540g00003 358 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 1 220 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr5540g00003 Mupr-Chr5540 31540 34883 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr5540g00003 4 230 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 53.725 9.22e-84 256
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr5540g00003 - - gmx:100802055 379.022