Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Mupr5532g00002 | ATGGAGGGTGGTTCTAACGAGGTTTCTAGTGTGATGGGTTTTGGAGAGCATACAAGTAGTAGTGGGGTTTGTCCAATGATGATGATGCCTTTAGTGACTTCTCATCATGCTGGTCATCATCCATTAAATCCTAATCTTAATAATCCCAATCCTAATGAACACACAAACACCAACACCAACACTCTCTTCCTTCCCATGCCTTGTCCTAATAATCTCCACCTAAACCGCAATAACCACAACTCCGACGCCACTGAGTTAGGGTATTTCATGGAGATCCACAACAACAACGATGGAAGCTCCTCTTCTTCTTCTTCTTCCTGTGTCAAGGCCAAGATCATGGCCCATCCTCACTATCACCGTCTCTTGGCAGCCTACGTCAATTGTCAAAAGGTTGGGGCTCCGCCTGAAGTGGTGGCAAGATTAGAAGAAGTATGTGCTTCTGCTGCAGTGACAATGGCCGGAGGAACAGCCCGCATCGGCGAGGATCCGGCGTTGGATCAGTTCATGGAGGCTTACTGCGAGATGCTGATCAAGTACGAGCAAGAGCTCTCTAAACCCTTCAAGGAAGCCATGCTCTTCCTTCAAAGGATCGAGTGCCAGTTTAAATCTCTTACTATTTCTTCATCTTCCGACACTGGTGGTGATAGGAATGGATCATCTGAAGAAGTTGATGTACAAAACAACTTAATAGATCCGCAGGCAGAAGACCAAGAACTGAAAGGTCAACTGTTACGGAAGTACCGAGGATACCTAGGCAGTTTGAAGCAGGAATTCACCAAAAAGAGGAAGAAAGGGAAACTACCCAAAGAGGCAAGGCAACAATTACTTGAATGGTGGAGCAGACACTACAAATGGCCTTACCCATCTGAATCTCAAAAGCTGGCTCTTGCGGAGTCAACAGGCCTGGATCAGAAGCAAATTAACAACTGGTTTATTAATCAAAGGAAACGGCACTGGAAGCCTTCAGAGGACATGCAATTTGTGGTGGTGGATCCAACCCATCCACACTACTACATGGAAAATGTTATGGCCAATCCCTTTCCCATGGATCTCTCCCACACAATGCTCTAA | 1071 | 0.4603 | MEGGSNEVSSVMGFGEHTSSSGVCPMMMMPLVTSHHAGHHPLNPNLNNPNPNEHTNTNTNTLFLPMPCPNNLHLNRNNHNSDATELGYFMEIHNNNDGSSSSSSSSCVKAKIMAHPHYHRLLAAYVNCQKVGAPPEVVARLEEVCASAAVTMAGGTARIGEDPALDQFMEAYCEMLIKYEQELSKPFKEAMLFLQRIECQFKSLTISSSSDTGGDRNGSSEEVDVQNNLIDPQAEDQELKGQLLRKYRGYLGSLKQEFTKKRKKGKLPKEARQQLLEWWSRHYKWPYPSESQKLALAESTGLDQKQINNWFINQRKRHWKPSEDMQFVVVDPTHPHYYMENVMANPFPMDLSHTML | 356 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Mupr5532g00002 | 356 | SMART | KNOX2_2 | 155 | 206 | IPR005541 | GO:0003677|GO:0005634 | |
Mupr5532g00002 | 356 | MobiDBLite | consensus disorder prediction | 40 | 58 | - | - | |
Mupr5532g00002 | 356 | ProSiteProfiles | ELK domain profile. | 238 | 258 | IPR005539 | GO:0003677 | |
Mupr5532g00002 | 356 | Pfam | KNOX1 domain | 108 | 146 | IPR005540 | GO:0003677|GO:0005634 | |
Mupr5532g00002 | 356 | MobiDBLite | consensus disorder prediction | 207 | 229 | - | - | |
Mupr5532g00002 | 356 | FunFam | Homeobox protein knotted-1-like 2 | 263 | 325 | - | - | |
Mupr5532g00002 | 356 | SMART | ELK_2 | 238 | 259 | IPR005539 | GO:0003677 | |
Mupr5532g00002 | 356 | Pfam | ELK domain | 238 | 258 | IPR005539 | GO:0003677 | |
Mupr5532g00002 | 356 | ProSiteProfiles | 'Homeobox' domain profile. | 258 | 321 | IPR001356 | GO:0003677 | |
Mupr5532g00002 | 356 | Pfam | Homeobox KN domain | 278 | 317 | IPR008422 | GO:0003677|GO:0006355 | |
Mupr5532g00002 | 356 | SUPERFAMILY | Homeodomain-like | 260 | 335 | IPR009057 | - | |
Mupr5532g00002 | 356 | ProSitePatterns | 'Homeobox' domain signature. | 296 | 319 | IPR017970 | GO:0000981|GO:0006355 | |
Mupr5532g00002 | 356 | PANTHER | HOMEOBOX PROTEIN TRANSCRIPTION FACTORS | 52 | 327 | - | - | |
Mupr5532g00002 | 356 | SMART | KNOX1_2 | 106 | 150 | IPR005540 | GO:0003677|GO:0005634 | |
Mupr5532g00002 | 356 | Pfam | KNOX2 domain | 159 | 205 | IPR005541 | GO:0003677|GO:0005634 | |
Mupr5532g00002 | 356 | MobiDBLite | consensus disorder prediction | 35 | 58 | - | - | |
Mupr5532g00002 | 356 | Gene3D | - | 263 | 325 | - | - | |
Mupr5532g00002 | 356 | SMART | HOX_1 | 260 | 325 | IPR001356 | GO:0003677 | |
Mupr5532g00002 | 356 | CDD | homeodomain | 270 | 322 | IPR001356 | GO:0003677 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Mupr5532g00002 | Mupr-Chr5532 | 28498 | 32918 | Dispersed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Mupr5532g00002 | 89 | 356 | Homeobox Transcription Factor Family | AT1G62360 | 76.655 | 3.37e-133 | 383 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | HB-KNOX | Mupr5532g00002 | KNOX2 | 6.9e-22 | No_clan |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Mupr5532g00002 | - | - | gmx:100127401 | 588.571 |