Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr5530g00001 ATGTGGTCGTTGATCCTCCTCTCTCTAGTCATGTATCCACAGCTTTCATCTTCATCCGTGGACACCATGCATCGAGGTTCGTCCCTCTCAGTGGAGAACCCCAAAGACGTCATGCTCTCACCAAACGGCATCTTCTCCGCCGGTTTCTACGCCGTTGGTCAAAACGCATACTCCTTCGCCGTTTGGTTCTCCGAACCCTACGCCCATACCCAAAACGCAACCGTCGTATGGATGGCGAACCGCGACCAACCCGTAAACGCCAAGGGCTCGAAGCTTTCCCTACACAACAGCGGCAACCTCGTCTTAACCGACGCCGACCAGTCCCACGTTTGGTCCACAGACACCGTTTCACTCTCCTCCTCCGTACTCCTATTTCTCGACAACACCGGCAACCTCGTTCTCCGCGAAACGGAGGCCGGCGGTGTCGTTTTGTGGCAAAGCTTTGATTTCCCTACGGACACCCTTCTGCCTCAACAAGTGTTCACGCGACACACGAAACTGGTCTCTTCTAGAAGCGACACCAATAAGTCCTCGAGCTTCTACACCTTGTTCTTCGACAACGACAACATTCTTCGCCTTCTTTACGATGGTCCTGAAGTTTCGGGACTTTACTGGCCGGATCCTTGGTTGAGCACGTGGAACGCTAGAAGATCGACTTACAATAACAGCAGAGTCGCGGTGATGGACACACTCGGTAATTTCAGTTCATCAGATGATTTAACTTTTATGACATCCGATTACGGCACTGTGATCCAACGAAGATTCATCCTTGACCATGATGGAAACCTTCGTGTTTATAGTCGGAGATATGGTGGAGAGAAATGGTCTATTACGTGGCAAGCCAAAAATAGGCCGTGTAGGATTCATGGTGTTTGTGGGCCCAATAGTTTGTGCTCTTATCATCAAAACTCTAGTGTGGAATGCTCTTGCCTTCCCGGGTACAAGTGGCAGAATGATCGCGATTGGAGTTATGGGTGTCAACCCGAATTTTCTACGTCTTGCAATAAAAACGAGTCTCGGTTTTTATTCATAAGCAACGTGGAGTTATTTGGCTATGACTATGGGATCATGACGAATTACACGCTGCATCAGTGCCAGGAGCTATGCCTTCAATTATGCAACTGTAAAGGCATCCAGTATATGTATGTCTTTGGCAGTGGCACTTATACCTGTTACCCTAAGTTGCAGTTGCGGAATGCGTATCGTACACCGTATTTTAGTGCTGATTTGTACTTGAAACTCCCAGCAAACAGTTCGTACTATTATGAGGGGTCCGCATATGACCACAGTATCGATTGCTCTTCGAGTACTTCCACAACGATAGAGCTTGAGAGAGCATATGACATGGGTCACGAGAGCAGATATGTTAAGTTCTTGTTTTGGTTTGTAGGGGGAGTGGGAGGGCTTGAATTTTTGTGCATATTTCTGATTTGGTTGTTTCTGGTGAGAACAAGGGGGCAACGGTATTCTGGTGTGGAAGGACGAGTCTATAATCTGGCCATGACAGGTTTTAGAAAATTCAGTTACTCTGAGCTGAAACAAGCCACCAAAGGTTTTAGTGAAGAGATAGGAAGGGGTGCAGGAGGGGTTGTATACAAAGGTGTGTTGTTGGACCAACGAGTTGCAGCAGTGAAGAGACTCAAGGATGCTAATCAAGGAGAAGAAGAGTTTCTGGCGGAAGTAAGCAGCATTGGAAGGCTTAACCACATGAACTTGATTGAGATGTGGGGGTACTGTGCTGAGGGAAAACACAGGCTGTTGGTGTATGAGTACATGGAGCATGGGTCTCTAGCACAAAACATCGAGTCCAATGCATTGGATTGGACCAAAAGGTTTGACATAGCCTTAGGTACGGCAAGAGGTCTAGCTTATATTCACGAGGAGTGTTTAGATTGGATTCTACACTGTGATGTAAAGCCCCAAAACATACTTCTAGATTCTAACTATCAACCAAAGGTTGCGGATTTTGGGTTGTCCAAACTGCGAAACAGAAATAATACTAGTACATACTCTAGTTTTTCGAGGATACGAGGAACAAGAGGGTACATGGCTCCTGAGTGGGTTTTTAACCTACCAATCACATCCAAAGTTGATGTCTATAGCTATGGAATTGTTGTTTTGGAAATGCTCACTGGAAAGAGCGCAACAAAGGATGTTGATAATGGAGAGGCGAGGCAGCATCTCAACCTGGTCGCGTGGCTTAAAGAGAAACAGAAAAATGGGTGTGGATGGGTTAGTGAAATCTTAGACCCCACGGTAGAAGGAGGTTATGAGGAGGGTAAGATGGAAGCTTTGGGTAGAGTGGCTCTGCAATGTGTGGAGGAAGAGAAGGACAAGAGGCCCACCATGAGCCAAGTAGTAGAGATGCTTCAGAAATCTAGCCGCCAAAATGATAATCAGTGA 2403 0.4673 MWSLILLSLVMYPQLSSSSVDTMHRGSSLSVENPKDVMLSPNGIFSAGFYAVGQNAYSFAVWFSEPYAHTQNATVVWMANRDQPVNAKGSKLSLHNSGNLVLTDADQSHVWSTDTVSLSSSVLLFLDNTGNLVLRETEAGGVVLWQSFDFPTDTLLPQQVFTRHTKLVSSRSDTNKSSSFYTLFFDNDNILRLLYDGPEVSGLYWPDPWLSTWNARRSTYNNSRVAVMDTLGNFSSSDDLTFMTSDYGTVIQRRFILDHDGNLRVYSRRYGGEKWSITWQAKNRPCRIHGVCGPNSLCSYHQNSSVECSCLPGYKWQNDRDWSYGCQPEFSTSCNKNESRFLFISNVELFGYDYGIMTNYTLHQCQELCLQLCNCKGIQYMYVFGSGTYTCYPKLQLRNAYRTPYFSADLYLKLPANSSYYYEGSAYDHSIDCSSSTSTTIELERAYDMGHESRYVKFLFWFVGGVGGLEFLCIFLIWLFLVRTRGQRYSGVEGRVYNLAMTGFRKFSYSELKQATKGFSEEIGRGAGGVVYKGVLLDQRVAAVKRLKDANQGEEEFLAEVSSIGRLNHMNLIEMWGYCAEGKHRLLVYEYMEHGSLAQNIESNALDWTKRFDIALGTARGLAYIHEECLDWILHCDVKPQNILLDSNYQPKVADFGLSKLRNRNNTSTYSSFSRIRGTRGYMAPEWVFNLPITSKVDVYSYGIVVLEMLTGKSATKDVDNGEARQHLNLVAWLKEKQKNGCGWVSEILDPTVEGGYEEGKMEALGRVALQCVEEEKDKRPTMSQVVEMLQKSSRQNDNQ 800
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr5530g00001 800 ProSitePatterns Protein kinases ATP-binding region signature. 523 545 IPR017441 GO:0005524
Mupr5530g00001 800 SUPERFAMILY Protein kinase-like (PK-like) 497 790 IPR011009 -
Mupr5530g00001 800 ProSitePatterns Serine/Threonine protein kinases active-site signature. 633 645 IPR008271 GO:0004672|GO:0006468
Mupr5530g00001 800 Gene3D - 15 149 IPR036426 -
Mupr5530g00001 800 ProSiteProfiles Bulb-type lectin domain profile. 14 147 IPR001480 -
Mupr5530g00001 800 ProSiteProfiles PAN/Apple domain profile. 334 415 IPR003609 -
Mupr5530g00001 800 CDD STKc_IRAK 523 792 - -
Mupr5530g00001 800 PANTHER OS07G0415500 PROTEIN 6 792 - -
Mupr5530g00001 800 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 592 800 - -
Mupr5530g00001 800 FunFam Putative receptor protein kinase ZmPK1 17 150 - -
Mupr5530g00001 800 CDD PAN_AP_plant 333 415 - -
Mupr5530g00001 800 SMART serkin_6 517 790 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr5530g00001 800 CDD B_lectin 39 151 IPR001480 -
Mupr5530g00001 800 Gene3D Phosphorylase Kinase; domain 1 486 591 - -
Mupr5530g00001 800 ProSiteProfiles Protein kinase domain profile. 517 800 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr5530g00001 800 FunFam S-receptor-like serine/threonine-protein kinase 487 591 - -
Mupr5530g00001 800 Pfam S-locus glycoprotein domain 233 316 IPR000858 GO:0048544
Mupr5530g00001 800 SMART blect_4 29 151 IPR001480 -
Mupr5530g00001 800 PIRSF SRK 1 800 IPR024171 GO:0004674
Mupr5530g00001 800 Gene3D Transferase(Phosphotransferase) domain 1 592 800 - -
Mupr5530g00001 800 Pfam Protein kinase domain 520 788 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr5530g00001 800 SMART ntp_6 336 414 IPR003609 -
Mupr5530g00001 800 SUPERFAMILY alpha-D-mannose-specific plant lectins 75 169 IPR036426 -
Mupr5530g00001 800 Pfam D-mannose binding lectin 74 166 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr5530g00001 Mupr-Chr5530 18526 20928 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr5530g00001 507 798 Trihelix Transcription Factor Family AT5G38560 41.667 1.37e-63 224
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Mupr5530g00001 Pkinase 6.6e-53 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr5530g00001 - - gmx:100792388 1325.07