Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr550g00003 ATGTATCCCAACCAAGCCTTTTCTTCAGGGTCCTATGCGGAAATGATGTCAGGGACTTCTCTGTTACCTCATGAGTACAGTGAATCTTTTGCTGGGGATTCCCATGTTGTTCCAAGGACACAAATGGGAATTGTGGATAGTGAGCAAAACATGCAGTGCCAGGGCTTATCTCTCAGTCTCGGGACACACATGCCTTCTTCTGCATCTCTCCCTCCATTTCAATACCAATATCACGACACTGGTCTCTTACCACTAATGACTGATTTTCCAAACCTAAAGGGAACCATGTCTTTCAAAGATGATGAGGCCAATAACCTGCATAAGGAGTTGACAAGTGCTGAATGCATGGCATCTGTGTCCTCTGGAGGCTTTCATGACATTATAAAAAAGGAGGGTTTTTACAATCCCCACCCTTCCATGTGTCTTAAGGAATACCCCTCTGATCTACCGGGTTACTCAAACGGTATTTTAAACTCCCAATACCTTAAGGCGGCGCAGGATTTGCTTGATGAAATTGTTAGTGTCCGAAAGGCTTTGAAGCAACCGGGAATGGAGAAACAAGACAACTGCCGTGACATTGGATTAGATGGCTCTAAAGATTCTGATGGAAAATCTAACAGTCAATCTTTGCAAATGTCTTCAGGCCCTAATGCTTCCTCTGAACTATCACCTAGTGAACGGCAGAACTTGTTGGACAAGAAAACAAAGCTTTTGTCCATGTTGGATGAGGTAGATAAAAAATACAGACAGTACTGCCATCAGATGCAGATTGTGGTGTCATCTTTTGACATGGTTGCTGGGTGTGGAGCAGCAGAACCATATACCACACTTGCTTTAAGAACAATTTCTCGGCACTTTCGGTGTTTGCGTGATGCCATCAGTGGCCAAATTCAAGCAACACAAAAGAGCCTCGGGGAGCAAGAGGGAATACCCCGTCTCCGCTATGTGGATCAGCAACTTAGACAACAAAAGGCCCTTCAACAACTTGGTGTAATGCGACAAGCTTGGAGGCCTCAGAGGGGGCTTCCTGAAAGCTCCGTTTCAATACTCCGTGCTTGGCTCTTTGAACATTTTCTCCATCCTTACCCCAAGGATTCAGAGAAAATTATGCTGGCGAGGCAAACAGGCTTGACCAGAAACCAGGTGGCAAATTGGTTCATCAATGCACGGGTGCGTCTTTGGAAGCCAATGGTTGAGGAAATGTACAAAGAGGAGTTTGGAGATTCCGAGATGAACTGCAACCTTGCATCTGAGACCACGGTCAAAGGTAAAAGAGATGATGTTCAAGAGTCCGATAATAATAACAAATGGGAGGAGTCACAGGAAAATTTAGTAACTGTTGAGAGTGTCCAAGGCCAATCTAATGGAGAAAATGTGGTGATGGATTCTGGAGGTGGGAAATTGCAGGGTAACCAAAAGCAAAGGCTTAGCATGAACAACAATTATTGTATCTCAAGCAATAATAACCAGAACGGTGGGGGTGAAAGCCTAATGGGTTCTAGTCCTCATGGCACATATGATATATCAGAGTTGGGTAACTTTACTATGGGAGGGCACGTCTCACTTGCATTGGAGTTGAGGAACTGTGAAAGCGATGGATTTACCATGTCTGATGATGGCATCCACAAAAGACGTAACCAAACATTGGCCTCTTCCCCGGAAACTGATTTGCTAGATTATCATTTCACGGATTCAGGAAAGCAACAACACAGGCACAACAATGTATTTCCTGAGGCCTTGGGAGCATTTCCTGAGGGGTCTGAGATCAGCCACACAAGGCACTTGATGGATCTTCTTGGAGCAGCTAATGAGACCATCCACCACCAGCCTCAAGGGCTTTCCCTCTCTTTAGGCTCTCACATGCATCAAAGACCCTTAAACCCGGTTCTCATCAACCCCAATTACTTCATGTCTGCACAACAACAAGAGCCACGTGACCCACCTGTGGACCATCTAACTAGTGACTACTTCTTCAACACTGCCGCTGCTGGCACCTTTGCTTCTTCCTCTTCTGCCCCTTTGAACCGTTCTCCTTCCACCTCTTATGCTGCTGAATCTTTTGCTGCTGTCATTGGCAACTCCAGATACCTCAAACCGGTTCAGTCCCTTCTTGAAGATCTTGTTGATGTTGGCGGAAATGTGGTCGATAGAATCAATGAAAAGTATGCTGACAAGTTGTTTCGTAGAGGAGGTGCTAGGACACTTTCCTCAGAGTTGAAGGCAGAGTTGAGGAATAATGCACCCTTATTGGCTGACAAACATGAACACCAAATCAAAATTGCAAGGTTGATTTCTTTGTTGGATGAGGTTGAGGGCAGGTGCGAGAAATACTACCATCAAATGGAAGAAGTGGTGTCATCCTTTGAAATGATAGCGGGTTTGGGAGCTGCCAAGTGTTACACTGCTTTGGCACTCCAAGCCATGTCAAGGCATTTCTGCAGCTTGAGAGATGCCATACTGTCACAAATAAATGCTGAGAAAAGAAAACTCTTTCAGGATTTACCTAAGATCAGTAGTGGCTTGTCTCAACTAAGCTTGTTTGATAGAGACAGCAGACAGAGTAGAATGTCTCTCCAACAACTTGGGGTGATCCAAAGCCAACGCCAAGTTTGGAGACCCATCAGAGGCTTGCCTGAAACCTCTGTGGCAATTCTTCGTTCTTGGCTCTTTGAGCACTTTCTCCACCCTTATCCTAATGATTCTGAAAAGTTAATGCTGGCATCTCAGACAGGTTTAACTAAAAACCAAGTCTCAAATTGGTTCATAAATGCTAGAGTACGGCTGTGGAAACCAATGATAGAAGAAATGTACAAAGAGGAGTTTGGAGAGTCTTCTGAAGACTCCAACCCTGCTGCTAACAACTACTTGACGAGGGAAGATACCACAGATTGTGTAGAGGATTGA 2904 0.449 MYPNQAFSSGSYAEMMSGTSLLPHEYSESFAGDSHVVPRTQMGIVDSEQNMQCQGLSLSLGTHMPSSASLPPFQYQYHDTGLLPLMTDFPNLKGTMSFKDDEANNLHKELTSAECMASVSSGGFHDIIKKEGFYNPHPSMCLKEYPSDLPGYSNGILNSQYLKAAQDLLDEIVSVRKALKQPGMEKQDNCRDIGLDGSKDSDGKSNSQSLQMSSGPNASSELSPSERQNLLDKKTKLLSMLDEVDKKYRQYCHQMQIVVSSFDMVAGCGAAEPYTTLALRTISRHFRCLRDAISGQIQATQKSLGEQEGIPRLRYVDQQLRQQKALQQLGVMRQAWRPQRGLPESSVSILRAWLFEHFLHPYPKDSEKIMLARQTGLTRNQVANWFINARVRLWKPMVEEMYKEEFGDSEMNCNLASETTVKGKRDDVQESDNNNKWEESQENLVTVESVQGQSNGENVVMDSGGGKLQGNQKQRLSMNNNYCISSNNNQNGGGESLMGSSPHGTYDISELGNFTMGGHVSLALELRNCESDGFTMSDDGIHKRRNQTLASSPETDLLDYHFTDSGKQQHRHNNVFPEALGAFPEGSEISHTRHLMDLLGAANETIHHQPQGLSLSLGSHMHQRPLNPVLINPNYFMSAQQQEPRDPPVDHLTSDYFFNTAAAGTFASSSSAPLNRSPSTSYAAESFAAVIGNSRYLKPVQSLLEDLVDVGGNVVDRINEKYADKLFRRGGARTLSSELKAELRNNAPLLADKHEHQIKIARLISLLDEVEGRCEKYYHQMEEVVSSFEMIAGLGAAKCYTALALQAMSRHFCSLRDAILSQINAEKRKLFQDLPKISSGLSQLSLFDRDSRQSRMSLQQLGVIQSQRQVWRPIRGLPETSVAILRSWLFEHFLHPYPNDSEKLMLASQTGLTKNQVSNWFINARVRLWKPMIEEMYKEEFGESSEDSNPAANNYLTREDTTDCVED 967
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr550g00003 967 MobiDBLite consensus disorder prediction 183 227 - -
Mupr550g00003 967 SUPERFAMILY Homeodomain-like 337 403 IPR009057 -
Mupr550g00003 967 MobiDBLite consensus disorder prediction 420 437 - -
Mupr550g00003 967 SMART HOX_1 336 400 IPR001356 GO:0003677
Mupr550g00003 967 SMART HOX_1 871 935 IPR001356 GO:0003677
Mupr550g00003 967 SUPERFAMILY Homeodomain-like 877 938 IPR009057 -
Mupr550g00003 967 SMART prehox3 685 821 IPR006563 -
Mupr550g00003 967 SMART prehox3 150 295 IPR006563 -
Mupr550g00003 967 ProSiteProfiles 'Homeobox' domain profile. 333 396 IPR001356 GO:0003677
Mupr550g00003 967 Pfam Homeobox KN domain 353 392 IPR008422 GO:0003677|GO:0006355
Mupr550g00003 967 Pfam Homeobox KN domain 888 927 IPR008422 GO:0003677|GO:0006355
Mupr550g00003 967 CDD homeodomain 336 397 IPR001356 GO:0003677
Mupr550g00003 967 CDD homeodomain 871 932 IPR001356 GO:0003677
Mupr550g00003 967 ProSiteProfiles 'Homeobox' domain profile. 890 931 IPR001356 GO:0003677
Mupr550g00003 967 MobiDBLite consensus disorder prediction 200 226 - -
Mupr550g00003 967 Pfam Associated with HOX 690 819 IPR006563 -
Mupr550g00003 967 Pfam Associated with HOX 156 294 IPR006563 -
Mupr550g00003 967 Gene3D - 866 946 - -
Mupr550g00003 967 Gene3D - 333 410 - -
Mupr550g00003 967 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 111 430 - -
Mupr550g00003 967 MobiDBLite consensus disorder prediction 183 199 - -
Mupr550g00003 967 MobiDBLite consensus disorder prediction 940 967 - -
Mupr550g00003 967 MobiDBLite consensus disorder prediction 420 440 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr550g00003 Mupr-Chr550 20859 28112 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr550g00003 675 950 Homeobox Transcription Factor Family AT2G16400 49.286 1.12e-75 254
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-BELL Mupr550g00003 POX 9.4e-50 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr550g00003 - - gmx:100791641 931.784