Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr5503g00003 GAAAAGCGAGTTTTAGATTCAGAACTTTGGCATGCTTGTGCTGGTCCTCTTGTTTCTTTACCAGCTGTTGGAAGCCGCGTGGTCTACTTTCCACAAGGTCACAGTGAACAGGTTGCAGTGTCTACTCACAGGGAAGTGGATGGCCATATACCCAGCTATCCAAGCTTACCACCGCAGCTTATTTGTCAACTTCATAATCTGACTATGCATGCAGATACTGAGACAGATGAAGTATATGCTCAGATGACCTTGCAACCTTTGAGTCCTCAAGAGCAGAAGGAGGCATACCTTCCAGCAGAGTTGGGCACTCCGAGTAAACAGCCAACAAACTACTTTTGCAAAATTTTGACAGCCAGTGACACTAGCACACATGGGGGATTCTCTGTTCCTCGCAGAGCAGCTGAAAAAGTTTTTCCTCCTTTGGACTTTTCACAACAGCCTCCTTGTCAAGAGTTAATTGCAAGGGATTTGCATGGTAATGAGTGGAAATTCAGACATATCTTCCGTGGCCAACCCAAAAGGCATCTACTTACAACAGGATGGAGTGTCTTTGTGAGTGCTAAAAGACTTGTTGCCGGTGATTCAGTGCTGTTTATCTGGAATGAAAAGAATCAATTGCTTCTTGGCATTCGGCGTGCCAATCGACCTCAACCTGTGATGCCTTCATCAGTGTTGTCAAGTGATAGCATGCACTTGGGGCTTCTCGCTGCTGCTGCTCATGCAGCTGCAACTAATAGTCGTTTCACCATCTTTTATAACCCACGTGCTAGCCCTTCAGAATTTGTCATACCTTTAGCGAAGTATGTTAAAGCTGTGTATCACACTCGAGTTTCAGTTGGTATGCGCTTCCGAATGCTGTTTGAAACAGAGGAATCTAGTGTGCGTCGATACATGGGCACAATAACTGGCATTAGTGACTTGGATTCTGTCCGGTGGCCTAATTCACATTGGCGCTCAGTCAAGGTTGGCTGGGATGAATCCACGGCAGGAGAGAGGCAACCTCGAGTGTCTTTATGGGAGATTGAGCCATTAACAACATTTCCAATGTATCCATCTCCATTCCCCCTTAGGCTTAAGAGACCATGGCCTCCAGTACTGCCTTCATTCCATGGCTTGAAGGATGATGATTATGGTATAAATTCTTCACTATTGTGGCTTCGAGATTCAGATAGAGGGCTTCAGTCTCTTAATTTTCAGGGGATTGGTGTTAATCCTTGGATGCAGCCAAGGCTTGATCCCTCTATGGTGAATTATCAAGCAGATATGTACCAGACTGTGGCTGCCGCCGCACTTCAGGATATGTGGACTTTCGATCCTTCCAAACAGCATCCTACTTCCTCAATTCAATTTCAGCAACCGCAGAACTTCCCTAACAGGACTTCTCCCTTAATGCAAACCCAAATGTTGCAGCCGACTCAACCTCAGCAGGCTTTTCCAAATAATCAAGAAAATCCACATCCACATCCATCACAATCTCAGCCTCAGGCTCAAACACAAACACATTTTCAGCAGCATCTACAGCATCAGCACTCGTTCAACAATCCGAACCAGCATCATCTTCTGCAACAGCAACAACAACCGCAACAAGTGGTGGATCATCAGCAAATTTCAAGTGCTGTCTCTACAATGTCTCAGTTTGTTTCAGCGACACAATCTCAATCACCACCCATGCAGGCTATCTCTTCACTGGGTCATCAGCAAAGTTTTTCTGATTCAAACGGGAACCCTGCTACTACTGCTATTGTTTCTCCCCTTCACAGTATATTGGGTTCATTTCCCCAGGACGAAACATCTCACCTTCTCAACCTTCCTAGAACTACCTCTTGGGTTCCTGTTCAACCTTCAACTGCATGGCCGCCCTCCAAGCGTGTTGCAGTGGATCCTCTCCTTTCTTCCGGAGCATCTCAATGTGTTCTGCCTCAAGTGGAGCAGTTAGGGCATCCACAGAGTACCATGGCTCAAAATGCTATCACATTGCCACCCTTTCCTGGTAGGGAGTGTACAATAGAAGGAACCACTGATCCACAAAATCATCTTCTGTTTGGGGTCAATATAGAGCCCTCATCACTTCTAATGCATAATGGGATGTCAGGCCTTAAGGGAGTCAGCAGCAACCGGGACTCACCAACCATACCTTTTCAGTCAACTAATTACCTGAACCCCACAGGCAGTGATTCTTCATTGAATCCTGGAATCACACACAACATTGGTGATTCGGGTTTCCTGCCAACTTCAGAAAATGGGGGGCAAGGAAACCCATCGAACAAAACCTTTGTGAAGGTTTACAAGTCAGGGTCCTTCGGAAGATCATTGGATATCACAAAATTCACCAACTACCATGAGCTACGCAGCGAGCTTGCTCGCATGTTTGGCCTTGAAGGTGAGTTGGAGGACCCTATGAGATCAGGCTGGCAGCTTGTATTCGTTGACCAAGAGAATGACGTTCTTCTCCTAGGCGATGGCCCTTGGCCGGAATTTGTAAATAGTGTATGGTGCATCAAGATACTTTCCCCTCAGGAAGTGCAGCAAATGGGGAACAATGGCCTTGAGCTTCTGAACTCGGTTCCAATTCAGAGGCTCTCTAACGGCGTCTGTGACGACTATGCAGGCCGTGAGGACCCAAGAAATTTAAGCACTGGGCTAACAACAGTGGGGTCTTTGAACTACTGA 2670 0.4648 EKRVLDSELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAVSTHREVDGHIPSYPSLPPQLICQLHNLTMHADTETDEVYAQMTLQPLSPQEQKEAYLPAELGTPSKQPTNYFCKILTASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPCQELIARDLHGNEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRANRPQPVMPSSVLSSDSMHLGLLAAAAHAAATNSRFTIFYNPRASPSEFVIPLAKYVKAVYHTRVSVGMRFRMLFETEESSVRRYMGTITGISDLDSVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSPFPLRLKRPWPPVLPSFHGLKDDDYGINSSLLWLRDSDRGLQSLNFQGIGVNPWMQPRLDPSMVNYQADMYQTVAAAALQDMWTFDPSKQHPTSSIQFQQPQNFPNRTSPLMQTQMLQPTQPQQAFPNNQENPHPHPSQSQPQAQTQTHFQQHLQHQHSFNNPNQHHLLQQQQQPQQVVDHQQISSAVSTMSQFVSATQSQSPPMQAISSLGHQQSFSDSNGNPATTAIVSPLHSILGSFPQDETSHLLNLPRTTSWVPVQPSTAWPPSKRVAVDPLLSSGASQCVLPQVEQLGHPQSTMAQNAITLPPFPGRECTIEGTTDPQNHLLFGVNIEPSSLLMHNGMSGLKGVSSNRDSPTIPFQSTNYLNPTGSDSSLNPGITHNIGDSGFLPTSENGGQGNPSNKTFVKVYKSGSFGRSLDITKFTNYHELRSELARMFGLEGELEDPMRSGWQLVFVDQENDVLLLGDGPWPEFVNSVWCIKILSPQEVQQMGNNGLELLNSVPIQRLSNGVCDDYAGREDPRNLSTGLTTVGSLNY 889
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr5503g00003 889 Gene3D - 110 213 IPR015300 -
Mupr5503g00003 889 Pfam B3 DNA binding domain 112 213 IPR003340 GO:0003677
Mupr5503g00003 889 FunFam Auxin response factor 751 845 - -
Mupr5503g00003 889 Gene3D - 276 348 - -
Mupr5503g00003 889 Pfam AUX/IAA family 753 841 IPR033389 -
Mupr5503g00003 889 MobiDBLite consensus disorder prediction 438 513 - -
Mupr5503g00003 889 ProSiteProfiles PB1 domain profile. 756 840 IPR000270 GO:0005515
Mupr5503g00003 889 FunFam Auxin response factor 110 214 - -
Mupr5503g00003 889 SUPERFAMILY CAD & PB1 domains 751 831 - -
Mupr5503g00003 889 Pfam Auxin response factor 238 321 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Mupr5503g00003 889 MobiDBLite consensus disorder prediction 547 578 - -
Mupr5503g00003 889 CDD B3_DNA 111 212 IPR003340 GO:0003677
Mupr5503g00003 889 Gene3D - 752 845 - -
Mupr5503g00003 889 SUPERFAMILY DNA-binding pseudobarrel domain 97 241 IPR015300 -
Mupr5503g00003 889 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 2 845 IPR044835 GO:0003677|GO:0006355|GO:0009725
Mupr5503g00003 889 FunFam Auxin response factor 276 348 - -
Mupr5503g00003 889 ProSiteProfiles B3 DNA-binding domain profile. 112 214 IPR003340 GO:0003677
Mupr5503g00003 889 SMART B3_2 112 214 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr5503g00003 Mupr-Chr5503 20768 26217 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr5503g00003 1 468 B3 DNA Binding Superfamily AT1G30330 84.501 0.0 798
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Mupr5503g00003 AUX_IAA 8.2e-07 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr5503g00003 - - gmx:100777789 1619.75