Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr5503g00002 GACAGCATCGTCTACATATTGAAGAGGCGCCCGAGTGAGCCTAAGCAGATCCACGAGATTAAGGATTTCCTTTTGACGGCGCGGAGGAAGGATGCGAGGTCTGTGAAAATCAAGAGGAGCAGGGACGTCGTTAAGTTTAAGGTTCGATGCTCCAAGTATTTGTACACTCTTTGTGTCTTTGACCCCGAGAAAGCCGATAAATTGAAGCAATCTCTTCCTCCCGGTTTGAGCGTTCAAGACCTGTAA 246 0.4797 DSIVYILKRRPSEPKQIHEIKDFLLTARRKDARSVKIKRSRDVVKFKVRCSKYLYTLCVFDPEKADKLKQSLPPGLSVQDL 81
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr5503g00002 81 FunFam 60S ribosomal protein L38 13 81 - -
Mupr5503g00002 81 Gene3D - 14 81 IPR038464 -
Mupr5503g00002 81 Pfam Ribosomal L38e protein family 14 80 IPR002675 GO:0003735|GO:0005840|GO:0006412
Mupr5503g00002 81 PANTHER 60S RIBOSOMAL PROTEIN L38 14 80 IPR002675 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr5503g00002 Mupr-Chr5503 13283 13739 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr5503g00002 14 81 Cytoplasmic Ribosomal Protein Gene Family AT3G59540 94.118 1.68e-42 130
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr5503g00002 K02923 - gmx:100787764 138.658