Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr5502g00002 ATGATCATTGAGTTGAGACATAAGCTCTTGATTTCCTTCCACAAGACCATTGATGGTCATGGTATGAACGTTCAGATCAAGAATGACGTATGTGAACAATGTCATCATCCATGGAATTCACATCAAGAAAATTGTGCCCAAAGATGGCAGCATGATCAGGAACTCCTACAACCACTTTGGATAGATCATGTTTACCTCTTTAACTCCGCCGACGGTTTTATCGATGTCATCATGAGTCCTACCACCATAACCATCTCAAATTGCCACATGACCAAACATAACAATGTGATACTATTTGGGGCCAGATACTAG 312 0.4071 MIIELRHKLLISFHKTIDGHGMNVQIKNDVCEQCHHPWNSHQENCAQRWQHDQELLQPLWIDHVYLFNSADGFIDVIMSPTTITISNCHMTKHNNVILFGARY 103
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr5502g00002 103 PANTHER PECTATE LYASE 18-RELATED 1 101 IPR045032 GO:0030570
Mupr5502g00002 103 Gene3D - 1 103 IPR012334 -
Mupr5502g00002 103 SUPERFAMILY Pectin lyase-like 3 102 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr5502g00002 Mupr-Chr5502 12499 12885 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr5502g00002 1 100 Polysaccharide Lyase AT1G30350 34.483 1.38e-15 68.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr5502g00002 K01728 - gmx:100810615 84.3445