Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr5498g00004 ATGGTTGAGATGCTTACATGTAGCTCTGCCTTTGGGTCACCAATTCTTCAGCATCACCCATTTTATGTAGTTTGTATTGGTGAGCTAGGTAGTGGTGTTAGTGCTATGGGGAGGCAACCTTGCTGTGACAAACTTGGAGTGAAAAAAGGTCCATGGACTGCTGAGGAAGACAAAAAACTAATCAACTTCATTCTCACCAATGGCCAGTGCTGTTGGCGTGCTGTTCCTAAGCTTGCTGGGCTTCGACGTTGTGGTAAGAGTTGTCGTCTTCGTTGGACTAATTATCTTCGCCCTGACTTGAAGAGAGGCCTCCTCACACAGGCAGAAGAGCAGCTAGTTATCGATCTCCATGCCCGTCTTGGCAACAGGTGGTCCAAGATTGCTGCCAGGTTACCAGGAAGGACAGACAACGAGATTAAAAATCACTGGAACACTCACATCAAGAAAAAGCTCCTTAAGATGGGTATTGATCCTGCTACTCATGATTCTCTTAACAAAGAATTCTCATCCCCAGCAGAGCATTTGCCACAAGTTGATAACACCCATCAGGTTGAGCAAAATGATGGGGTTCTCAACTCGGAAGAGAATTTCACCTCATCACCAGCTGAAAATTCTTCTGGGGATCGCATTTGCAGCGATGTGTCTCTAATGAACAACATGTGGCTGGATGAAACTCCTCTATTGGACACATTGTGGGACAATACACTTAAAGTAGAGAATGCAATTAATAATGACATGGGCTTGCCAATATGGGAGGATAATTGTGCCTGGTTGTTGGACTGCCACGACTTTGGTATTCATGATTTTGGTTTTAATTGCTTTAGCGAGATTGAGTCAAATGCACTGCAAACTATAGCCATGGACAGAAAAGGGATTTAG 879 0.4437 MVEMLTCSSAFGSPILQHHPFYVVCIGELGSGVSAMGRQPCCDKLGVKKGPWTAEEDKKLINFILTNGQCCWRAVPKLAGLRRCGKSCRLRWTNYLRPDLKRGLLTQAEEQLVIDLHARLGNRWSKIAARLPGRTDNEIKNHWNTHIKKKLLKMGIDPATHDSLNKEFSSPAEHLPQVDNTHQVEQNDGVLNSEENFTSSPAENSSGDRICSDVSLMNNMWLDETPLLDTLWDNTLKVENAINNDMGLPIWEDNCAWLLDCHDFGIHDFGFNCFSEIESNALQTIAMDRKGI 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr5498g00004 292 ProSiteProfiles Myb-like domain profile. 97 147 IPR001005 -
Mupr5498g00004 292 FunFam MYB transcription factor 46 102 - -
Mupr5498g00004 292 ProSiteProfiles Myb-like domain profile. 44 96 IPR001005 -
Mupr5498g00004 292 SUPERFAMILY Homeodomain-like 46 143 IPR009057 -
Mupr5498g00004 292 CDD SANT 51 96 IPR001005 -
Mupr5498g00004 292 PANTHER F14D16.11-RELATED 36 203 - -
Mupr5498g00004 292 Gene3D - 105 177 - -
Mupr5498g00004 292 Gene3D - 47 102 - -
Mupr5498g00004 292 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 44 96 IPR017930 -
Mupr5498g00004 292 FunFam MYB transcription factor 103 164 - -
Mupr5498g00004 292 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 97 151 IPR017930 -
Mupr5498g00004 292 SMART sant 101 149 IPR001005 -
Mupr5498g00004 292 SMART sant 48 98 IPR001005 -
Mupr5498g00004 292 CDD SANT 106 147 IPR001005 -
Mupr5498g00004 292 Pfam Myb-like DNA-binding domain 49 96 IPR001005 -
Mupr5498g00004 292 Pfam Myb-like DNA-binding domain 106 146 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr5498g00004 Mupr-Chr5498 20377 22407 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr5498g00004 36 271 MYB Transcription Factor Family AT4G22680 58.271 1.45e-96 283
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mupr5498g00004 Myb_DNA-binding 3.1e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr5498g00004 K09422 - gmx:100800360 476.092