Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr5492g00001 ATGAACACATTCTCACATGTACCTCCAGGCTTTCGGTTTCATCCGACCGATGAAGAGCTAGTTGGTTACTACCTTAGGAAAAAGGTAGCGTCTAAAAGGATTGATCTAGATGTCATCAAAGATGTCGAGCTCTATAAAATTGAACCATGGGATCTCCAAGAATTATGCAAAATAGGAACGGATGAACAAAGTGACTGGTATTTCTTCAGTCATAAAGATAAGAAATACCCAACTGGATCTCGCACCAATAGAGCTACAAAAGCAGGATTCTGGAAAGCCACGGGAAGAGACAAGGCAATATACTCTAAGCACTGCCTGATTGGCATGAGAAAGACTCTAGTGTTCTACAAAGGACGAGCCCCAAATGGACAGAAGTCTGATTGGATCATGCATGAGTACAGGCTAGAAACTAATGAAAATGGAACTTCTCAGGTAATTACCACTGTTATCCTTCTTGTGGTTCAAGAAGAAGGGTGGGTTGTGTGTAGAGTGTTCAAGAAGCGAATGCCAACAATGCAAAAAGTGGGAGAGTATGATCAGTCACCCTGTTGGTACGATGAGCAAGTTTCCTTCATGCAAGATCTTGAATCCCCAAGGCACATTTCTCAGCCTTATGCATCATATCACCCCTGCAAGCCTGAGCTCATGGAACTGCAATACAACATCCCCCACGATGCATTCCTCCAACTTCCCCAACTTGAAAGCCCCAAAGTTACTCAATCAGCAGCCAGCTCAGTTGTCCCTTATGCTTATGAAAGCAACAACAACAATGGAAGCACCTTGCAGTTCTCGTCACTGACTCAGGAGGAACAGATTCAATATTGCCATCAACAAAGTCACCATTCTCTCTATGGTAGCAATGATCATGCGGTTGACCAAGTCACAGACTGGAGAGTACTTGACAAATTTGTTGCTTCTCAGCTGAGTCACAACCAAGATGTTTCCAAGGAAACTAGTTTTTCCAATGCTCCTATCTTCCATGTGGCTGAACAAATTTCTGTGGTTGCAAATGACGGATCCAAAAAGGAGCAAATTTCCCAGGAGTATGCTTCAACGTCTACCTCCAGTTGCCAGATTGACCTGTGGAAGTGA 1092 0.4359 MNTFSHVPPGFRFHPTDEELVGYYLRKKVASKRIDLDVIKDVELYKIEPWDLQELCKIGTDEQSDWYFFSHKDKKYPTGSRTNRATKAGFWKATGRDKAIYSKHCLIGMRKTLVFYKGRAPNGQKSDWIMHEYRLETNENGTSQVITTVILLVVQEEGWVVCRVFKKRMPTMQKVGEYDQSPCWYDEQVSFMQDLESPRHISQPYASYHPCKPELMELQYNIPHDAFLQLPQLESPKVTQSAASSVVPYAYESNNNNGSTLQFSSLTQEEQIQYCHQQSHHSLYGSNDHAVDQVTDWRVLDKFVASQLSHNQDVSKETSFSNAPIFHVAEQISVVANDGSKKEQISQEYASTSTSSCQIDLWK 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr5492g00001 363 SUPERFAMILY NAC domain 5 167 IPR036093 GO:0003677|GO:0006355
Mupr5492g00001 363 ProSiteProfiles NAC domain profile. 7 167 IPR003441 GO:0003677|GO:0006355
Mupr5492g00001 363 Gene3D NAC domain 16 170 IPR036093 GO:0003677|GO:0006355
Mupr5492g00001 363 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 6 279 - -
Mupr5492g00001 363 FunFam NAC domain-containing protein 16 171 - -
Mupr5492g00001 363 Pfam No apical meristem (NAM) protein 8 135 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr5492g00001 Mupr-Chr5492 9712 12760 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr5492g00001 1 363 NAC Transcription Factor Family AT1G12260 56.873 2.06e-135 388
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Mupr5492g00001 NAM 3.5e-37 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr5492g00001 - - gmx:100783529 654.44