Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr5484g00001 ATGGGCAACACATGCCGTGGATCTTTGAAAGGGAAATATATTCAGGGCTTCAGCCAGCCCGAAGACCACACCAAGCGCACCACCCATTCTGATCCCTCTGACTCCGAACACAACTCAACAAAACAAAATCCCAATTCTTCAGAAAACATTATCAACAACAATCTCAATCTACCTTTCAACTCCAAGAAAGACGCCATCATGCGCCGAGGCCTCGACAACCAAGCATATTATGTATTGGGCCACAAGACACCCAACATTCGTGATCTGTACACTCTTGGCCGTAAATTGGGGCAGGGACAGTTTGGCACCACTTATTTATGCACCGAAAATTCTACCTCCATTGAATATGCATGCAAATCCATCTCCAAAAGGAAGTTGATTTCCAAGGAGGACGTCGAGGACGTTAGGCGGGAAATTCAGATAATGCATCATTTAGCTGGTCATAAGAACATTGTCACCATCAAGGGTGCTTATGAGGATCCTCTCTATGTTCATATTGTCATGGAGCTTTGTTCTGGAGGCGAGTTGTTTGATCGCATCATCCAGAGGGGCCACTACACCGAGAGGAAGGCTGCAGAGTTGACCAAAATCATTGTTGGGGTTGTTGAGGCATGCCATTCCCTTGGGGTTATGCACAGAGATCTCAAGCCTGAAAACTTTTTGTTGGTCAATAAAGATGATGATTTCTCTCTTAAAGCAATTGACTTTGGCCTCTCCGTTTTCTTCAAACCTGGTCAAGTTTTCACTGATGTAGTTGGCAGCCCGTACTATGTTGCTCCTGAGGTCCTCCTCAAGCATTATGGGCCTGAAGCAGATGTGTGGACAGCAGGTGTCATACTGTACATATTGCTCAGTGGCGTGCCACCATTTTGGGCAGAGACCCAGCAGGGTATATTTGATGCAGTATTGAAGGGACATATAGATTTTGACTCGGATCCTTGGCCTCTAATATCTGACAGTGGAAAAGATCTGATTAGAAAGATGCTGTGTTCTCGGCCTTCAGAACGGTTGACTGCTCACCAAGTGTTGTGTCATCCTTGGATATGTGAAAATGGAGTTGCCCCTGACAGGGCACTGGATCCTGCTGTTCTTTCTCGTCTCAAACAGTTTTCTGCAATGAATAAGCTAAAGAAGATGGCTCTGCGAGTAATTGCTGAAAGTCTATCCGAAGAGGAGATTGCTGGTTTGAGGGAAATGTTTCAGGCTATGGATACTGATAACAGTGGTGCAATCACTTTTGATGAACTCAAAGCTGGTCTAAGAAGATATGGGTCTACCCTTAAGGATATAGAAATACGTGATCTTATGGAAGCGGCTGATGTGGACAAAAGTGGAACCATAGATTATGGGGAATTTATTGCTGCAACAGTTCATCTCAACAAACTAGAACGTGAAGAACATCTCATTGCAGCATTCCAATATTTTGACAAGGATGGTAGCGGTTATATTACAGTTGATGAACTTCAACAAGCTTGTGCAGAACATAACATGACTGATGTTTTTCTTGAAGATATTATTAGGGAAGTTGATCAAGATAATGATGGAAGGATTGACTATGGTGAATTTGCTGCCATGATGCAAAAAGGCAACCCTGGAATTGGTAGGAGGACTATGCGCAACAGTCTGAATTTAAGCATGAGAGATGCACCAAGTTCTTGA 1659 0.4376 MGNTCRGSLKGKYIQGFSQPEDHTKRTTHSDPSDSEHNSTKQNPNSSENIINNNLNLPFNSKKDAIMRRGLDNQAYYVLGHKTPNIRDLYTLGRKLGQGQFGTTYLCTENSTSIEYACKSISKRKLISKEDVEDVRREIQIMHHLAGHKNIVTIKGAYEDPLYVHIVMELCSGGELFDRIIQRGHYTERKAAELTKIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQVFTDVVGSPYYVAPEVLLKHYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFDSDPWPLISDSGKDLIRKMLCSRPSERLTAHQVLCHPWICENGVAPDRALDPAVLSRLKQFSAMNKLKKMALRVIAESLSEEEIAGLREMFQAMDTDNSGAITFDELKAGLRRYGSTLKDIEIRDLMEAADVDKSGTIDYGEFIAATVHLNKLEREEHLIAAFQYFDKDGSGYITVDELQQACAEHNMTDVFLEDIIREVDQDNDGRIDYGEFAAMMQKGNPGIGRRTMRNSLNLSMRDAPSS 552
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr5484g00001 552 SUPERFAMILY Protein kinase-like (PK-like) 71 372 IPR011009 -
Mupr5484g00001 552 SMART serkin_6 90 348 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr5484g00001 552 ProSiteProfiles EF-hand calcium-binding domain profile. 502 532 IPR002048 GO:0005509
Mupr5484g00001 552 ProSiteProfiles EF-hand calcium-binding domain profile. 391 426 IPR002048 GO:0005509
Mupr5484g00001 552 FunFam Calcium-dependent protein kinase 1 356 530 - -
Mupr5484g00001 552 Gene3D - 358 529 - -
Mupr5484g00001 552 ProSiteProfiles Protein kinase domain profile. 90 348 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr5484g00001 552 ProSitePatterns EF-hand calcium-binding domain. 404 416 IPR018247 -
Mupr5484g00001 552 ProSiteProfiles EF-hand calcium-binding domain profile. 463 498 IPR002048 GO:0005509
Mupr5484g00001 552 PANTHER SERINE/THREONINE-PROTEIN KINASE 82 522 - -
Mupr5484g00001 552 SMART efh_1 395 423 IPR002048 GO:0005509
Mupr5484g00001 552 SMART efh_1 501 529 IPR002048 GO:0005509
Mupr5484g00001 552 SMART efh_1 431 459 IPR002048 GO:0005509
Mupr5484g00001 552 SMART efh_1 467 495 IPR002048 GO:0005509
Mupr5484g00001 552 MobiDBLite consensus disorder prediction 37 54 - -
Mupr5484g00001 552 CDD STKc_CAMK 90 347 - -
Mupr5484g00001 552 FunFam Calcium-dependent protein kinase 5 176 356 - -
Mupr5484g00001 552 MobiDBLite consensus disorder prediction 1 54 - -
Mupr5484g00001 552 Gene3D Transferase(Phosphotransferase) domain 1 176 357 - -
Mupr5484g00001 552 ProSitePatterns EF-hand calcium-binding domain. 476 488 IPR018247 -
Mupr5484g00001 552 ProSitePatterns EF-hand calcium-binding domain. 510 522 IPR018247 -
Mupr5484g00001 552 MobiDBLite consensus disorder prediction 22 36 - -
Mupr5484g00001 552 ProSiteProfiles EF-hand calcium-binding domain profile. 427 462 IPR002048 GO:0005509
Mupr5484g00001 552 Gene3D Phosphorylase Kinase; domain 1 92 175 - -
Mupr5484g00001 552 Pfam Protein kinase domain 90 348 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr5484g00001 552 SUPERFAMILY EF-hand 372 529 IPR011992 -
Mupr5484g00001 552 Pfam EF-hand domain pair 466 527 IPR002048 GO:0005509
Mupr5484g00001 552 Pfam EF-hand domain pair 396 456 IPR002048 GO:0005509
Mupr5484g00001 552 ProSitePatterns Protein kinases ATP-binding region signature. 96 119 IPR017441 GO:0005524
Mupr5484g00001 552 ProSitePatterns Serine/Threonine protein kinases active-site signature. 210 222 IPR008271 GO:0004672|GO:0006468
Mupr5484g00001 552 ProSitePatterns EF-hand calcium-binding domain. 440 452 IPR018247 -
Mupr5484g00001 552 FunFam Calcium-dependent protein kinase 1 92 175 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr5484g00001 Mupr-Chr5484 18455 28549 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr5484g00001 1 549 EF-hand Containing Proteins AT2G17290 83.993 0.0 957
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Mupr5484g00001 Pkinase 1.9e-72 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr5484g00001 K13412 - gmx:100778173 1048.88