Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr5475g00002 ATGAAGATCGAGGAATTGGACGATGCGGAGTGTAGTAGGGATGAAGAACAGAAGTTCGAGAGGCAGATTGTGAGCGTTGACGCCAAAAGAGCGTTGGTGGGAGCAGGTGCTCGGATCCTCTTCTATCCGACGCTCTTGTATAATGTGCTTCGCAACAAAATTGAAACCGAGTTCAGGTGGTGGGATCAAATTGACGAGTTTTTGTTACTAGGCGCTGTTCCCTTCCCCAAAGACGTTCCTCACTTGAAGAAGCTTGGTGTGGGTGGTGTTATCACTCTCAATGAACCTTATGAAACCTTGGTGCCATCGTCGTTGTATTGGGCTCACGGGATTGATAATTTGGTGATTCCCACTAGAGATTATCTCTTTGCCCCCTCGTTTGTTGATATCAACCGGGCTGTGCAGTTCATTCATCAGAATGCATGCTGCGGTAAAACTACTTATGTTCACTGTAAAGCTGGGCGGGGGAGGAGTACAACAATCGTGCTTTGTTATCTGGTCGAATACAAGCACATGACACCTGCTGCTGCTCTGGAATATGTTCGGTCTCGAAGACCCAGAGTGCTACTAGCACCATCACAGTGGAAGGCTGTTCAAAACTATAACAAGCGAAGACCTTGTACTTTACCATACTCTCCCTCTGGGGATGCAGTTCTTATAACCAAAGCCGATCTTGAAGGCTATCACAGCACATGTGATGCTGGAATGGAGCTGGCCATTGTTCCCAAAGTGCCAAGGACTATGCCCATGATTGCAAGATTATCTTGCCTGTTCGCATCCTTAAAAGTATCCGGTAGTAGTGTACCAATGACCAGGCGGCTGCCAGTTTCCGAGTCGCGGGCTTGCTAA 849 0.4782 MKIEELDDAECSRDEEQKFERQIVSVDAKRALVGAGARILFYPTLLYNVLRNKIETEFRWWDQIDEFLLLGAVPFPKDVPHLKKLGVGGVITLNEPYETLVPSSLYWAHGIDNLVIPTRDYLFAPSFVDINRAVQFIHQNACCGKTTYVHCKAGRGRSTTIVLCYLVEYKHMTPAAALEYVRSRRPRVLLAPSQWKAVQNYNKRRPCTLPYSPSGDAVLITKADLEGYHSTCDAGMELAIVPKVPRTMPMIARLSCLFASLKVSGSSVPMTRRLPVSESRAC 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr5475g00002 282 ProSitePatterns Tyrosine specific protein phosphatases active site. 149 159 IPR016130 GO:0016311|GO:0016791
Mupr5475g00002 282 CDD PTPMT1 60 204 IPR044596 GO:0004721
Mupr5475g00002 282 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 128 196 IPR000387 GO:0016311|GO:0016791
Mupr5475g00002 282 SMART dsp_5 63 204 IPR020422 GO:0006470|GO:0008138
Mupr5475g00002 282 Gene3D Protein tyrosine phosphatase superfamily 60 206 IPR029021 -
Mupr5475g00002 282 ProSiteProfiles Dual specificity protein phosphatase domain profile. 60 207 IPR020422 GO:0006470|GO:0008138
Mupr5475g00002 282 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 53 203 IPR029021 -
Mupr5475g00002 282 PANTHER PHOSPHATIDYLINOSITOL PHOSPHATASE 1 260 - -
Mupr5475g00002 282 FunFam Dual specificity phosphatase domain protein 60 207 - -
Mupr5475g00002 282 Pfam Dual specificity phosphatase, catalytic domain 100 203 IPR000340 GO:0008138|GO:0016311
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr5475g00002 Mupr-Chr5475 17680 19319 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr5475g00002 22 270 Protein tyrosine phosphatase (PTP) family AT2G35680 52.901 5.53e-98 289
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr5475g00002 - - gmx:100817410 546.969