Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr5475g00001 ATGAATAAGATGAGCAACTTGAGTTGTGTGAGGAGCTCTGATCTCATAGATGCGAAGCTGGAAGAGCATCAACTGTGTGGATCCAAACAGTGCCCAGATTGTGGACACAAGTTTGAAGGGAAGCCGGACTGGCTAGGTCTACCAGCGGGAGTGAAATTCGATCCAACAGATCAAGAACTCATAGAACACCTTGAAGCCAAAGTAGAGGCCAAGAATATGAAATCACACCCTTTGATAGATGAGTTCATTCCCACTATTGAAGGAGAAGATGGGATTTGTTACACCCATCCTGAGAAACTTCCAGGAGTGACAAGAGATGGCTTAAGCAGACACTTCTTCCACAGGCCCTCAAAGGCATACACAACGGGGACACGAAAGAGGAGAAAGATTCAAAACGAGTGCGACTTGCAAGGAGGGGAAACACGATGGCACAAGACAGGTAAGACGAGGCCAGTGATGGTGAACGGGAAACAAAAGGGTTGCAAGAAGATTCTAGTGCTCTATACCAACTTCGGCAAGAACAGAAAGCCCGAGAAGACCAACTGGGTGATGCACCAGTACCATCTGGGTCAGCACGAGGAAGAGAAAGAGGGAGAGCTCGTGGTGTCAAAGATATTCTACCAGACGCAGCCCAGGCAATGTAATTGGTCTGACAAAAGTGCCACAACCGGTGAAGGAAGTGGAGAACAACATCCTCACAATAATGGAACAAGAGACAGTGGAAGTGGGAGTTGTTCTTCTAAGGAAATTGTTGCTCACAGAGATGAAATGTCTGCTGTCGTTGGAGTCCCTCCAATAACAACTTTCAACACTGCCTTCGACATTCAACAACTTAAATCCGACCATTTCAGCTTCATCCCATTCAGAAAAAGCTTCGATGAGGTTGGAATAGGAGAAGCTTCCACAGGAAGAGAAATGCAAGCATCGGGGTCATGCGATGAAGGGCATGTAGCACATCATCATCAACAGCAACAACAACAACATGTGCACCAACAAATTGCAACCACAGCCTACCATATCAGTAGGCCTTCGCATCCCATCTCCACCATCATCTCTCCTCCACCCCTTCACCATGCATCCATCATCCTAGACGACAACTCCTACCATGTCTCTAGAATAATGCTCCAAAATGAAAATTTCCAGCAACAACATCATAAACTAGGAGGAAGGTCTGCGTCTGGTTTGGAGGAACTTATCATGGGGTGCACTTCAACTGATATCAAAGAGGAGTCATCCATTACAAACCCTCAAGAAGCTGAATGGTTGAAGTACTCCTCTTACTGGCCAGACCCTGGCAACCTGCATGATCATCATGAGTAG 1320 0.4652 MNKMSNLSCVRSSDLIDAKLEEHQLCGSKQCPDCGHKFEGKPDWLGLPAGVKFDPTDQELIEHLEAKVEAKNMKSHPLIDEFIPTIEGEDGICYTHPEKLPGVTRDGLSRHFFHRPSKAYTTGTRKRRKIQNECDLQGGETRWHKTGKTRPVMVNGKQKGCKKILVLYTNFGKNRKPEKTNWVMHQYHLGQHEEEKEGELVVSKIFYQTQPRQCNWSDKSATTGEGSGEQHPHNNGTRDSGSGSCSSKEIVAHRDEMSAVVGVPPITTFNTAFDIQQLKSDHFSFIPFRKSFDEVGIGEASTGREMQASGSCDEGHVAHHHQQQQQQHVHQQIATTAYHISRPSHPISTIISPPPLHHASIILDDNSYHVSRIMLQNENFQQQHHKLGGRSASGLEELIMGCTSTDIKEESSITNPQEAEWLKYSSYWPDPGNLHDHHE 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr5475g00001 439 MobiDBLite consensus disorder prediction 216 247 - -
Mupr5475g00001 439 Pfam No apical meristem (NAM) protein 48 189 IPR003441 GO:0003677|GO:0006355
Mupr5475g00001 439 PANTHER NAC DOMAIN-CONTAINING PROTEIN 73 12 327 IPR044799 GO:0003700
Mupr5475g00001 439 MobiDBLite consensus disorder prediction 216 248 - -
Mupr5475g00001 439 ProSiteProfiles NAC domain profile. 47 208 IPR003441 GO:0003677|GO:0006355
Mupr5475g00001 439 SUPERFAMILY NAC domain 43 208 IPR036093 GO:0003677|GO:0006355
Mupr5475g00001 439 Gene3D NAC domain 56 212 IPR036093 GO:0003677|GO:0006355
Mupr5475g00001 439 FunFam NAC domain-containing protein 73 56 212 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr5475g00001 Mupr-Chr5475 103 4251 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr5475g00001 4 428 NAC Transcription Factor Family AT5G56620 54.267 8.13e-137 397
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Mupr5475g00001 NAM 2.8e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr5475g00001 - - gmx:100794811 807.749