Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr5463g00004 ATGACTGGTTTTGGGCCGGGCCAGAGTACCCTTATTAGGGTTCTTCAGAATGATATCGATTTGTTAAATCCCCCAGTTGAGCTAGAGAAGAGAAAGCACAAACTCAAGCGTCTTGTTCAGTCGCCAAACTCTTTCTTCATGGATGTTAAGTGCCAGGGTTGCTTCAATATAACCACTGTCTTTAGCCACTCTCAGACCGTTGTTGTATGCGGAAACTGTCAGACTGTTTTGTGCCAACCGACTGGCGGGCGGGCAAGGCTAACTGAAGGATGCTCCTTTAGAAAGAAGGGAGACTAA 297 0.468 MTGFGPGQSTLIRVLQNDIDLLNPPVELEKRKHKLKRLVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCGNCQTVLCQPTGGRARLTEGCSFRKKGD 98
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr5463g00004 98 Gene3D - 17 97 IPR023407 -
Mupr5463g00004 98 Pfam Ribosomal protein S27 42 96 IPR000592 GO:0003735|GO:0005840|GO:0006412
Mupr5463g00004 98 SUPERFAMILY Zn-binding ribosomal proteins 42 96 IPR011332 GO:0006412
Mupr5463g00004 98 FunFam 40S ribosomal protein S27 13 98 - -
Mupr5463g00004 98 ProSitePatterns Ribosomal protein S27e signature. 50 82 IPR000592 GO:0003735|GO:0005840|GO:0006412
Mupr5463g00004 98 Hamap 30S ribosomal protein S27e [rps27e]. 36 96 IPR000592 GO:0003735|GO:0005840|GO:0006412
Mupr5463g00004 98 PANTHER 40S RIBOSOMAL PROTEIN S27 14 98 IPR000592 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr5463g00004 Mupr-Chr5463 6021 7292 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr5463g00004 14 98 Cytoplasmic Ribosomal Protein Gene Family AT3G61110 94.118 6.38e-58 171
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr5463g00004 K02978 - cmos:111455834 176.022