Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr545g00003 ATGAATCTCAGCAACGGCAAGGGATCCACTTCGAGTTCTCCTCTCAAAACCGGCGACGCCGTCTCCGACCAGTTTCCGGTTGGTCTCCGGGTGCTCGTGGTGGATGATGACCCCACGTGCCTTATGATCCTTGAGAGGATGCTGCGTGCTTGTCTCTATGAAGTGACGAAATGCAAGCGAGCTGAGGTTGCATTGTCGCTTCTGAGAGAGAACAAAAACGGATTTGATGTTGTTTTAAGCGACGTGCATATGCCGGATATGGATGGATTTAAGCTTTTGGAGCATATTGGGTTGGAGATGGACCTTCCGGTTATTATGATGTCAGCTGATGATGGAAAAAATGTTGTGATGAAAGGGGTGAAACACGGTGCTTGTGATTACCTGATTAAACCTGTGCGAATTGAGGCTTTGAAGAATATATGGCAGCATGTGATTCGGAAGAGAAAGAGTGGGGGGAAAGATGTGGAGCAATCAGGCAGTGTGGAAGAAGTAGATCGGCCTCAAAAGGGATCTGATGATGGAGATTACTCATCCTCAGTGAATGAAGGCAAAAGCTCAAAGAAACGGAGGGATGAGGAAGAGGAAGGAGAGGAGAGGGATGATACCTCTGCGTTGAAGAAGCCACGAGTTGTTTGGTCTGTTGAGCTTCATCAACAGTTCATGGCTGCTGTGAATCAACTTGGAATTGATAAAGCTGTTCCTAAAAGGATTTTGGAATTGATGAATGTTCCCGGGCTCACTAGAGAAAATGTTGCTAGCCACCTTCAGAAATATCGTTTGTATCTTAGAAGGCTGAGTGGAGTTTCACAGCAGCATAGTAATTTGAACAACTCCTTCATGAGCTCACAAGAAGCAACGTTTGGGTCAACATCAATCAATGGAATTGATCTTCAAACTCTTTCAGTTGCTGGCCAGCTCCCATCACAAAGTCTAGCCAAACTTCAAGCCGCAGGACTTGGCAGGTCAACGGCTAAACCAGGTATGCCTATGCATCTATCTGAGCAGAAGAACCTTTTCAGTTTTGAGAACCCAAGATTAAGATTTGGAGAAGGGCAACTGCAACATTTAAGCAACAGTAAACCAATAAACTTGCTTCATGGAATTCCTACCAGCATGGAGCCAAAACAACTTGCCAATTTGCACCAATCTACCCAATCCCTTGGCAACATGAATATGCGAGTCAGTGCTCCTGCTGCACAGAACAACCCTTTGTTGATGCATATAGCTCAGTCTCAACCAATAGGACAGATGCTAAATGAAAATGCTGGTTCTCATGTAACCAGGTTTCCATCATCTTTGATGCAGCCTACACTACCAAATGGTATTTCTAATGGTGTTTTGGGAAATGGGATTGCTGGCACCAGCAACATAACTACCGCTTATAATTCAGTTCCACAAAACTCCTCATTGTTGAGTTTTCCCATGAACCATACCAATGAAATGTCTGTTGGTAGTTTCCCTCTTAGAAGCACTCCAGGTATAACCGGTATCCCATCAAAAGGCATGTTTCATGAAGAAGGTACCTCAAATATTAAAGGACCTGGTGGATTTGTTCAAAGTTATGATATGTTCAATGAACTCCACCATCAGAAGTCACATGATTGGGACTTAACAAACACGGGCATGACGTATGATACTTCTCAGAACGCAAATCCTTTACAAGGTAACATTGATGTCTCACCATCAGTTTTAGTCCATCAGGGTTTTCCCTCTATGCAACAGGCTGCACAAAATAGAGATACTACTTCAATTGGAAAAGCTATGTTCACCACAGGTGAAGGCATACATCAAGGTAATCTCCAAAATGTTGGTCAACACCACAATAACAATAACCTTTTTGTTGACAATTCAGTAAGGGTTAAGGCTGAAAGAATTCCTGAACCAAGCTCCCAGATTAATAACCTCCTCTCTGAGCAATATGGTCAGGAGGATCTTCTCAGTGCATTTCTGAAACAGCAAGAAGGCGTTGGACCGTCTGAAACTGAGTTTGACTTTGATGGATATTCTTTAGACAACATTCCGGTTTAG 2028 0.4349 MNLSNGKGSTSSSPLKTGDAVSDQFPVGLRVLVVDDDPTCLMILERMLRACLYEVTKCKRAEVALSLLRENKNGFDVVLSDVHMPDMDGFKLLEHIGLEMDLPVIMMSADDGKNVVMKGVKHGACDYLIKPVRIEALKNIWQHVIRKRKSGGKDVEQSGSVEEVDRPQKGSDDGDYSSSVNEGKSSKKRRDEEEEGEERDDTSALKKPRVVWSVELHQQFMAAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQKYRLYLRRLSGVSQQHSNLNNSFMSSQEATFGSTSINGIDLQTLSVAGQLPSQSLAKLQAAGLGRSTAKPGMPMHLSEQKNLFSFENPRLRFGEGQLQHLSNSKPINLLHGIPTSMEPKQLANLHQSTQSLGNMNMRVSAPAAQNNPLLMHIAQSQPIGQMLNENAGSHVTRFPSSLMQPTLPNGISNGVLGNGIAGTSNITTAYNSVPQNSSLLSFPMNHTNEMSVGSFPLRSTPGITGIPSKGMFHEEGTSNIKGPGGFVQSYDMFNELHHQKSHDWDLTNTGMTYDTSQNANPLQGNIDVSPSVLVHQGFPSMQQAAQNRDTTSIGKAMFTTGEGIHQGNLQNVGQHHNNNNLFVDNSVRVKAERIPEPSSQINNLLSEQYGQEDLLSAFLKQQEGVGPSETEFDFDGYSLDNIPV 675
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr545g00003 675 Gene3D - 204 266 - -
Mupr545g00003 675 PANTHER TWO-COMPONENT RESPONSE REGULATOR 29 347 IPR045279 GO:0009736
Mupr545g00003 675 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 206 263 IPR017930 -
Mupr545g00003 675 Gene3D - 29 160 - -
Mupr545g00003 675 MobiDBLite consensus disorder prediction 182 204 - -
Mupr545g00003 675 Pfam Myb-like DNA-binding domain 209 259 IPR001005 -
Mupr545g00003 675 CDD REC_typeB_ARR-like 31 145 - -
Mupr545g00003 675 PIRSF RR_ARR_type-B 5 666 IPR017053 GO:0003677|GO:0003700|GO:0009736
Mupr545g00003 675 FunFam Two-component response regulator 203 266 - -
Mupr545g00003 675 ProSiteProfiles Response regulatory domain profile. 30 145 IPR001789 GO:0000160
Mupr545g00003 675 Pfam Response regulator receiver domain 31 139 IPR001789 GO:0000160
Mupr545g00003 675 NCBIfam myb-like DNA-binding domain, SHAQKYF class 207 260 IPR006447 GO:0003677
Mupr545g00003 675 SMART REC_2 29 141 IPR001789 GO:0000160
Mupr545g00003 675 FunFam Two-component response regulator 29 166 - -
Mupr545g00003 675 SUPERFAMILY Homeodomain-like 205 264 IPR009057 -
Mupr545g00003 675 SUPERFAMILY CheY-like 28 149 IPR011006 -
Mupr545g00003 675 MobiDBLite consensus disorder prediction 151 172 - -
Mupr545g00003 675 MobiDBLite consensus disorder prediction 151 204 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr545g00003 Mupr-Chr545 24790 28033 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr545g00003 63 675 Response Regulator Gene Family AT3G16857 48.250 6.97e-173 506
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-ARR-B Mupr545g00003 Response_reg 3.8e-23 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr545g00003 - K14491 gmx:100809583 1164.44