Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr5443g00012 ATGGAAGATTCAGAGGAAGAAGAGCTTTTGAATCTTACTCTTTCAGTTGCTGATGGTAGGGAGAGGAAAAAGGAAGGAAGGATAAGGGATAATAATGTTAGTTCTATTATTATTCCTATGAACTCCAATGAAGGCTATGAAGGGAAGATCTTTAGGCTCCTCCAAATGAGGGAGCTGATGCTAAGACAAGACCACAGAAGAAAAGGAGTGGTTGAGGATGGGAATGGCCTTCCTTTGATTCACTTGCTTCTCTCAACTGCCACTGCTGTTGATGGAAGAAACTTGAGTGCAGCTCTAGAGAACCTCATTGAATTGTATCAAACAGTTTCCTTAACAGGTGACTCGGTTCAGCGTGTGGTGGCCTATTTTGCTGATGGTTTGGCCGCAAGGCTTCTCACAAGGAAGTCCCCATTCTATGACATGCTCATGGAGGAGCCAACAAGTGAGGAAGAGTTTCTTGCATTCACAGATCTTTATAGAGTCTCACCCTTTTACCAATTTGCTCATTTCACAGCAAACCAGGCTATTTTGGAGGCCTATGAGGAGGAGGAAGAGAGGAACAACAAAGCACTTCATGTCATTGACTTCGATGTCTCCTATGGCTTCCAGTGGCCTTCTCTTATTCAATCACTTTCTGAAAAGGCAACCAGTGGCAACAGAATATCCCTCAGGATAACAGGCTTTGGGAACAACCTGAAGGAGCTGCAAGAAACTGAAGCCAGGTTAGTTAGCTTCTCAAAGGGGTTTGGCAACCACCTCGTGTTTGAGTTTCAAGGGCTGCTTAGAGGCTCACTCTCACCAAGGCTCATCAACCTGAGGAAGAAGAAAAATGAAACTGTGGCAGTGAACCTTGTTTCTTACTTGAACACTTTGAGCAGTTTCATGAAGGTCTCTGACACATTGGGATTTGTTCATTCTCTTAACCCCTCCATTGTGGTGCTGGTGAAACAAGAAGGTAGCAGGAATCTCAAGTCCTTCTTGTCAAGGTTCACTGAGTCTTTGCACTACTTTGCAGCCATGTTTGATTCACTGGATGATTGCTTGCCACTTGAGAGCACTGAGAGGTTGAGGATTGAGAAGAAGCTCTTGGGGAAAGAGATCAAAAGCATGCTCAACTATGACATGGATGGTGTGGATTGCCCAAAATATGAGAGGATGGAAGCATGGAAAGCAAGAATGGAGAATCATGGGTTTGTTGGGAGAAAGATAAGCTCAAAGTGTGTGATCCAAGCAAAGTTGCTTCTGAAGATGAGGACCCATTATTATCCATTACAGTTTGAGGAAGAGGGTAGTGGTGGGGGTTTCAGAGTTTCTGAAAGGGATGAAGGAAGAGTTATCTCTTTGGGGTGGCAAAATAGGTTTCTTCTCACTGTCTCAGCATGGAAACCACTGAAAACAGAAAACCCTAGTTTGAGCCATCAACACATATATTGCCCAGAAATGTAA 1446 0.4391 MEDSEEEELLNLTLSVADGRERKKEGRIRDNNVSSIIIPMNSNEGYEGKIFRLLQMRELMLRQDHRRKGVVEDGNGLPLIHLLLSTATAVDGRNLSAALENLIELYQTVSLTGDSVQRVVAYFADGLAARLLTRKSPFYDMLMEEPTSEEEFLAFTDLYRVSPFYQFAHFTANQAILEAYEEEEERNNKALHVIDFDVSYGFQWPSLIQSLSEKATSGNRISLRITGFGNNLKELQETEARLVSFSKGFGNHLVFEFQGLLRGSLSPRLINLRKKKNETVAVNLVSYLNTLSSFMKVSDTLGFVHSLNPSIVVLVKQEGSRNLKSFLSRFTESLHYFAAMFDSLDDCLPLESTERLRIEKKLLGKEIKSMLNYDMDGVDCPKYERMEAWKARMENHGFVGRKISSKCVIQAKLLLKMRTHYYPLQFEEEGSGGGFRVSERDEGRVISLGWQNRFLLTVSAWKPLKTENPSLSHQHIYCPEM 481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr5443g00012 481 ProSiteProfiles GRAS family profile. 70 462 IPR005202 -
Mupr5443g00012 481 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 76 457 IPR005202 -
Mupr5443g00012 481 Pfam GRAS domain family 79 462 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr5443g00012 Mupr-Chr5443 73414 75158 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr5443g00012 87 463 GRAS Transcription Factor Family AT3G54220 35.659 7.12e-57 198
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Mupr5443g00012 GRAS 2.6e-91 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr5443g00012 - - gmx:100798251 771.926