Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr5441g00003 ATGCCTCACCCATACTCTCCCTCCATCCTCCTCTCCCAACAAGATTCTCACACTCACATCAACACCCCATCTTCACCTTCCTTTTTTCCCGACACCGACCACCTTCTCTCTCTACTCTCCAAACAGACAGCCACGCACTCCACGCTCTCTCCTCGCCACCACGTCGTACGTTGGATTTCTACACTTTCTAAGTTCCACGGTTTCGCTGCTCTGACCACTGTTCTGGCCGTTAACTACTTCGACAGGTTCGCGGCGACCCTAAGGTTTCAGTGGGACAAGCCCTGGATGACTCAGCTGGCCGCAGTTGCTTGCGTGTCGCTCGCGGCCAAAGTGGAGGAGACACGCGTGCCACTTCTTTTCGACTTTCAACTGGAAGAATCCAAGTTCGTCTTTGAAGCAAAGACCATACAGAGAATGGAGCTCCTACTGTTGTCCACTCTCCAATGGAAAATGAACCCCGTCACCCCAATTTCTTTCTTTCAACACATTCTCACCACGCTTCGTTTAAAAAATTCCAACTTTCTCTGTAGGTGCGAACGTCTTCTTCTCTCTGTCATTGCGGATTCGAGGGTTATGAGTTACCTTCCTTCTACATTGGCTGCTGCTATAATGATCCACGTTGTTAAAGAGATTGAACCGTTTAATGCAACGGAGTACCGAAATCAGATTCTTAGTTTACTCAAATGTAGTGAGGAACAAGTGAATGAGTGCTACAAACTGATGCTGAGACTATTAGTTTGCTGTGAAGGCATTCACAATCTTGGTCAGAAGCGCAAACGTTTATGTGAACCAAGTAGCCCTGGTGGGGTCATGGATGCATCTTTCAGTTGTGACAGTTCAAATGATTCATGGACGGTGGAGTCAGTGTTTAAGAGGAGCAAAGTTCAAGACCAGCAGATGCGGTTGCGTTCAGTGAATCGAGTGTCTATTGATATTCTAAATACTCCT 948 0.4726 MPHPYSPSILLSQQDSHTHINTPSSPSFFPDTDHLLSLLSKQTATHSTLSPRHHVVRWISTLSKFHGFAALTTVLAVNYFDRFAATLRFQWDKPWMTQLAAVACVSLAAKVEETRVPLLFDFQLEESKFVFEAKTIQRMELLLLSTLQWKMNPVTPISFFQHILTTLRLKNSNFLCRCERLLLSVIADSRVMSYLPSTLAAAIMIHVVKEIEPFNATEYRNQILSLLKCSEEQVNECYKLMLRLLVCCEGIHNLGQKRKRLCEPSSPGGVMDASFSCDSSNDSWTVESVFKRSKVQDQQMRLRSVNRVSIDILNTP 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr5441g00003 316 Gene3D - 45 152 - -
Mupr5441g00003 316 SMART cyclin_7 57 145 IPR013763 -
Mupr5441g00003 316 SMART cyclin_7 158 243 IPR013763 -
Mupr5441g00003 316 Pfam Cyclin, C-terminal domain 154 245 IPR004367 -
Mupr5441g00003 316 SMART Cyclin_C_2 154 279 IPR004367 -
Mupr5441g00003 316 CDD CYCLIN_AtCycD-like_rpt2 154 241 - -
Mupr5441g00003 316 FunFam D6-type cyclin 33 152 - -
Mupr5441g00003 316 Gene3D - 153 239 - -
Mupr5441g00003 316 CDD CYCLIN_AtCycD-like_rpt1 52 149 - -
Mupr5441g00003 316 Pfam Cyclin, N-terminal domain 40 152 IPR006671 -
Mupr5441g00003 316 PANTHER CYCLINS 42 242 IPR039361 -
Mupr5441g00003 316 SUPERFAMILY Cyclin-like 41 152 IPR036915 -
Mupr5441g00003 316 SUPERFAMILY Cyclin-like 136 246 IPR036915 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr5441g00003 Mupr-Chr5441 13879 15112 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr5441g00003 23 307 Core Cell Cycle Gene Families AT5G67260 49.038 5.81e-92 277
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr5441g00003 K14505 - gmx:100802683 463.381