Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr5409g00014 ATGAATTCAAGTTCAAGCCAGTTCGACGGCAACGCTGCTTTCTCCGGCGGCGGATTCATGCCTACTCAGGCTACTCAGGGCCCGGACCCTTCCTTCCTTTCCTCCAAGAATCGCGATGCTCAGTCCTTGCTTCCTCTTACAGTGAAGCAGATAAACGACGCGTTTCAGTCAAGTGACGATAAAACCAATTTGATTGTTGACGGTGTGGACGTTAACAATGTTACTCTTGTAGGAAGGGTGTGCAACAAAGCTGGACGTATTACTGATATTACTTTTGTGCTTGATGATGGTACTGGAAGGATAGACTGTAATAAATGGCTTCAGGAAGCTGCTGATACAAATGAAGCGGAGGGTATCTTGGACGGAATGTATGTGAGGCTCCATGGACACTTGAAAGGTTTTCAGGGTAAAAGGACCTTAAATGTTTTCTCTTTTAGGCCTGTGACTGACTTTAATGAGATTGCCAGCCATTTCATCGATTGCATATATGTGCATCTCTATAATTGCAGATTACGGACTAGTGTCCCTAATCAGCAATATGTTATGAATTCCACACCAATTACTCCAACAAAAAGTTATCAAGCTCAAGCTGTTCTTCCACCACCAAATCAGTTCTCTGGTCAACATATCAATGGTCAGAAGAGTGTTGAAGAAAGGATCTTAGATATTTTGCATCTTCCTGCAAACAGTGCAAGGCATGAGGGAGTCCCTCGTGAACTTATTGCACAGCATCTTGGAATTTCTTCGGATAAGCTGATGCTAGCTTTTAAAAATCTTATTGAGGAAGGTTCCATTTATGAAGCTATAGCTGATCACTACAAGTCAGTCATCAATGGTTGA 840 0.4262 MNSSSSQFDGNAAFSGGGFMPTQATQGPDPSFLSSKNRDAQSLLPLTVKQINDAFQSSDDKTNLIVDGVDVNNVTLVGRVCNKAGRITDITFVLDDGTGRIDCNKWLQEAADTNEAEGILDGMYVRLHGHLKGFQGKRTLNVFSFRPVTDFNEIASHFIDCIYVHLYNCRLRTSVPNQQYVMNSTPITPTKSYQAQAVLPPPNQFSGQHINGQKSVEERILDILHLPANSARHEGVPRELIAQHLGISSDKLMLAFKNLIEEGSIYEAIADHYKSVING 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr5409g00014 279 FunFam replication protein A 32 kDa subunit A-like 36 170 - -
Mupr5409g00014 279 Pfam Replication protein A C terminal 165 271 IPR014892 -
Mupr5409g00014 279 MobiDBLite consensus disorder prediction 1 36 - -
Mupr5409g00014 279 SUPERFAMILY "Winged helix" DNA-binding domain 211 276 IPR036390 -
Mupr5409g00014 279 Gene3D - 35 170 IPR012340 -
Mupr5409g00014 279 PIRSF RPA32 2 277 IPR014646 GO:0003677|GO:0005634|GO:0006260|GO:0006281|GO:0006310
Mupr5409g00014 279 Pfam OB-fold nucleic acid binding domain 74 145 IPR004365 GO:0003676
Mupr5409g00014 279 Gene3D - 207 277 IPR036388 -
Mupr5409g00014 279 PANTHER REPLICATION PROTEIN A-RELATED 7 276 IPR040260 -
Mupr5409g00014 279 SUPERFAMILY Nucleic acid-binding proteins 43 168 IPR012340 -
Mupr5409g00014 279 CDD RPA2_DBD_D 73 166 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr5409g00014 Mupr-Chr5409 73851 77794 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr5409g00014 4 276 Core DNA Replication Machinery Family AT2G24490 44.928 1.35e-76 233
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr5409g00014 K10739 - gmx:100782819 440.654