Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr5409g00011 ATGTCTATGCTCTATCTTCACATTTTCAATTCCTTTGCACAATTTTTTGTTAAGCTTCTTATTGCTGCAAGTCTCCTTTCTGGATCTGTTGTTCATGTGAGGTGCTTGAATTTCAGCTATCCAACTTTCTATTATGAAAACATTACAGATTTCAACATGTCTACAAATTCAATCATACACAAAGGTACTATTGAAGTCCCCATAGAGGCATCATCAGGATCAAAGATCTCAAACTCAAACCTTTCTAGTAGGGTCTTCTATAGTGAGCAGCTGAAGCTATGGGACAGTCAAAGAGGGATGAAAACTTCATTCAATTCAACTTTTGTTTTCAATGTGCATCCTTTAACCTCTCCTGGCGGTGAGGGATTTGCTTTCATAGTGGCAGCCAACACCTCTCTTCCAAGAAACAGTGCAGGTCAATGGCTTGGGATTGTGAACTCAACAAGCATAGGGGTAAGCAACATAGTTGCAGTGGAATTTGACACAAGGAAAAGCTACCCTGATGATATTGATGACAACCATGTTGGGGTGGATGTAAAGAGCATCTATTCCATCAAGCAAGAATCTCTTGGACCACATGGTGTTAATCTTTCTAGTGCCACTGATCTTGTTGCTACTGTTTACTTTGATGCTGAAGATGGGAAAATGAGCATTTTTGTTTCTAAATCAGATTTGAAGTTAAGAAAAGAAGTCCTTGTAGTGGATCTTGATCTCTCTAAACTGCTTCCAGAAGATGCTTTTGTGGGGTTTTCAGGTTCCACAGGGGTATATACTCAGGTCAACACTATAAGATCATGGTATTTCTCAAGCTGGGAGTATATTGAAAAGAATCCCATAAATCTAACATGGTTATGGATCTTGATTCCAATAATTGTGGTTGGAGGAGCATGTGGGCTTGCTAGTGTGTGGTATTGCAGAAACAAACACAGAAAGGAACAAGAGTTGGAGGAAGATCTGAACATAGAGCTTGAAATTAAAAGCTCATCTAATGCTCCACATAAGTTTCAGCTGAAGGAGCTTGTGTCTGCCACAAGGAACTTCCACTCATCAAACAAGCTAGGGAAAGGAGGATTTGGGATGGTTTATAGAGGCACCTTGAAGGGAAAAGATATTGCTGTGAAGAGGATTTCAAAGAATTCACGTCATGGGAAGCAAGATTTTATAGCAGAAATCACCACCATTGGGAATCTCAACCACAAAAATCTAGTGAAGTTAATAGGATGGTGCTATGAGAAGGGTGAGATCCTCCTTGTGTATGAGCTCATGCAAAATGGTAGCTTAGACAGATTCATTTTTTCCACATGTGGAGGGGATACAACTCTGAGTTGGGAAAGGAGGCTTAGTGTTATATGTGGGGTTTCTAAAGCACTGGATTATCTTCACAATGGATGTGACAAAAGAGTGCTACATAGAGACATAAAACCAAGCAATGTGATGTTGGATTCTGAGTTCAATGCTCGGCTTGGAGACTTTGGCTTAGCTCGCACCATTCATCTTAATGAAAAATCTCACCACTCAACAAGAGAAATTGCTGGAACACCAGGGTACATGGCACCAGAAAGCTTTCACACCAGAAGGGCTTCGGTTGAAACTGATGTCTATGCATTTGGTATTCTGATGCTGGAGGTTGTGTGTGGAGGAAGAAAGGCTGAACACAAACAGGATTTGAGATGTTGTAACAGCATTGTGGACTTGGTTTGGGAGCTTCATGGCAGAGGAAACATAACTGATGCTGTGGATTTGAGACTGAATGGTGATTTTGATAAGGCTCAAGCCAAGTGTTTGCTTGAGTTGGGGTTAGCTTGTTGCCATCCTAATCCATATGAAAGGCCATCAATGAAAACTGTGTTGCAGGTGCTAACAGGGGAAGCATCTCCTCCTTTTGTAGCTTTTGAAAAGCCTGCTTTCACATGGCCAACCACTGCTCCTGTTCTCAATCAACAGTTGAATTTCCAAGCAACGATATCCCAAAATGAACCAATCACAGAACTCATTATTTTTTAA 2004 0.4082 MSMLYLHIFNSFAQFFVKLLIAASLLSGSVVHVRCLNFSYPTFYYENITDFNMSTNSIIHKGTIEVPIEASSGSKISNSNLSSRVFYSEQLKLWDSQRGMKTSFNSTFVFNVHPLTSPGGEGFAFIVAANTSLPRNSAGQWLGIVNSTSIGVSNIVAVEFDTRKSYPDDIDDNHVGVDVKSIYSIKQESLGPHGVNLSSATDLVATVYFDAEDGKMSIFVSKSDLKLRKEVLVVDLDLSKLLPEDAFVGFSGSTGVYTQVNTIRSWYFSSWEYIEKNPINLTWLWILIPIIVVGGACGLASVWYCRNKHRKEQELEEDLNIELEIKSSSNAPHKFQLKELVSATRNFHSSNKLGKGGFGMVYRGTLKGKDIAVKRISKNSRHGKQDFIAEITTIGNLNHKNLVKLIGWCYEKGEILLVYELMQNGSLDRFIFSTCGGDTTLSWERRLSVICGVSKALDYLHNGCDKRVLHRDIKPSNVMLDSEFNARLGDFGLARTIHLNEKSHHSTREIAGTPGYMAPESFHTRRASVETDVYAFGILMLEVVCGGRKAEHKQDLRCCNSIVDLVWELHGRGNITDAVDLRLNGDFDKAQAKCLLELGLACCHPNPYERPSMKTVLQVLTGEASPPFVAFEKPAFTWPTTAPVLNQQLNFQATISQNEPITELIIF 667
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr5409g00011 667 Gene3D - 34 279 - -
Mupr5409g00011 667 FunFam probable L-type lectin-domain containing receptor kinase S.5 422 626 - -
Mupr5409g00011 667 SMART serkin_6 347 628 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr5409g00011 667 SUPERFAMILY Protein kinase-like (PK-like) 328 620 IPR011009 -
Mupr5409g00011 667 ProSitePatterns Protein kinases ATP-binding region signature. 353 374 IPR017441 GO:0005524
Mupr5409g00011 667 Pfam Legume lectin domain 36 272 IPR001220 GO:0030246
Mupr5409g00011 667 ProSitePatterns Serine/Threonine protein kinases active-site signature. 468 480 IPR008271 GO:0004672|GO:0006468
Mupr5409g00011 667 CDD lectin_legume_LecRK_Arcelin_ConA 36 270 IPR001220 GO:0030246
Mupr5409g00011 667 CDD STKc_IRAK 353 622 - -
Mupr5409g00011 667 PANTHER - 73 627 - -
Mupr5409g00011 667 Gene3D Transferase(Phosphotransferase) domain 1 422 626 - -
Mupr5409g00011 667 ProSiteProfiles Protein kinase domain profile. 347 629 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr5409g00011 667 FunFam serine/threonine-protein kinase PBS1-like 311 421 - -
Mupr5409g00011 667 ProSitePatterns Legume lectins beta-chain signature. 156 162 IPR019825 -
Mupr5409g00011 667 SUPERFAMILY Concanavalin A-like lectins/glucanases 35 276 IPR013320 -
Mupr5409g00011 667 Gene3D Phosphorylase Kinase; domain 1 325 421 - -
Mupr5409g00011 667 Pfam Protein kinase domain 347 618 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr5409g00011 Mupr-Chr5409 37151 39737 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr5409g00011 16 638 Receptor kinase-like Gene Family AT5G55830 35.725 1.26e-118 367
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Mupr5409g00011 Pkinase 1.7e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr5409g00011 - - qsa:O6P43_009469 883.248