Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr5409g00010 ATGTGTCTGCCTTGGTTAGTCAAATATCAATTAGCAGCAACCATCTTCATTATCATTGCCCTTACCAAAGTTATCTTCTTATATTTCAATTTCCCTACCTTCCAAACACAGGATGCAGCTCATTTATTGCTGAGCAAGTGTTCAAATATATATTTAAATACCATCCAAGTAACCCCAGATATTCCGGGTGACAACTCAAACTATTCTGGTAGTGTCATCTGTAGAGAACAACTGAAGCTATGGAACAGTCAAAGAGGCATGAAAGCCTCATTCAATTCAACTTTTGTTTTCAATCTTAATCCTTTAATCTCTCCTGGTGATGAGGGATTGGCCTTCATATTGACAGCTGATACCTCTCTTCCAAGCAACAGTGCAGATTTGAAGTTGAGAAAAGAAGTCCTTGTAGTGGATCTTGATCTCTCCAAACAGCTTCCAGAAGATATTTTTGTGGGATTTTCAGCTTCCACAGGGCTAAAGGAGCTTGTATCTGCCACAAGGAATTTCCACTCATCAAACAAGCTTGGGAAAGGAGGGTTTGGGATGGTTTATAGAGGCACCTTAAACGGCAAAGATGTTGCTGTGAAGAGGATTTCAAAGAATTTACGTCATGGGAAGCAAGATTTTATAGCAGAAATCACCACCATTGGGAATCTCAACCACAAAAAGCTGGTGAAGTTAATAGGATGGACACTGGATTATCTTCACAATGGATGTGACAAAAGAGTGCTACACAGAGACATAAAACCAAGCAATCTGATGTTAGATTCTGAGTTCAATGCTCGGCTTGGAGACTTTGGCTTAGCTCGCACCATTCATCTTAATGAAAAATCTCACCACTCAACAAGAGAAATTGCTGGAACACCAGGGTACATGGCACCAGAAAGCTTTCACACCAGAAGGTCTGCGGTTGAAACTGATTTCTATGCATTTGGTATTCTGATACTGGAGGTTGTTTGTGGAGGAAGAAAGGCTGAACACAAACAGGATCTGAGATGTTGTAACAGCATTGTGGACTTGGTTTGTGAGCTTCATGGCAGAGAAAACATAACTGATGCTGTGGATTTGAGACTGAATGGTGATTTTGATAAGGCTCAAGCCAAGTGTTTGCTTGAGTTGGGGTTAGCATGTCGCCATCCTAATCCATATGAAAGGCCATCAATGAAAACTGGTGTTGCAGGTGAAGCAGCTCCACCTTTTGTAGCTTTTGAGAAGCCTGCTTTCACATGGCCAACCACTGCTCCTGTTCTCAATCAACAGTTGAATTTCCAACCAACTCTATCCCAAAATCAACCAATCACAGAACTCATTAGTGGGAGATGA 1320 0.4129 MCLPWLVKYQLAATIFIIIALTKVIFLYFNFPTFQTQDAAHLLLSKCSNIYLNTIQVTPDIPGDNSNYSGSVICREQLKLWNSQRGMKASFNSTFVFNLNPLISPGDEGLAFILTADTSLPSNSADLKLRKEVLVVDLDLSKQLPEDIFVGFSASTGLKELVSATRNFHSSNKLGKGGFGMVYRGTLNGKDVAVKRISKNLRHGKQDFIAEITTIGNLNHKKLVKLIGWTLDYLHNGCDKRVLHRDIKPSNLMLDSEFNARLGDFGLARTIHLNEKSHHSTREIAGTPGYMAPESFHTRRSAVETDFYAFGILILEVVCGGRKAEHKQDLRCCNSIVDLVCELHGRENITDAVDLRLNGDFDKAQAKCLLELGLACRHPNPYERPSMKTGVAGEAAPPFVAFEKPAFTWPTTAPVLNQQLNFQPTLSQNQPITELISGR 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr5409g00010 439 ProSitePatterns Serine/Threonine protein kinases active-site signature. 242 254 IPR008271 GO:0004672|GO:0006468
Mupr5409g00010 439 PANTHER - 158 230 - -
Mupr5409g00010 439 SMART serkin_6 168 400 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr5409g00010 439 FunFam Lectin-domain containing receptor kinase A4.3 211 411 - -
Mupr5409g00010 439 Pfam Legume lectin domain 28 125 IPR001220 GO:0030246
Mupr5409g00010 439 SUPERFAMILY Protein kinase-like (PK-like) 149 388 IPR011009 -
Mupr5409g00010 439 Gene3D - 26 129 - -
Mupr5409g00010 439 ProSiteProfiles Protein kinase domain profile. 97 400 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr5409g00010 439 ProSitePatterns Protein kinases ATP-binding region signature. 174 195 IPR017441 GO:0005524
Mupr5409g00010 439 SUPERFAMILY Concanavalin A-like lectins/glucanases 26 165 IPR013320 -
Mupr5409g00010 439 Gene3D Transferase(Phosphotransferase) domain 1 233 396 - -
Mupr5409g00010 439 Pfam Protein kinase domain 231 390 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr5409g00010 439 Pfam Protein kinase domain 168 229 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr5409g00010 439 Gene3D Phosphorylase Kinase; domain 1 150 232 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr5409g00010 Mupr-Chr5409 32280 34231 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr5409g00010 159 415 Receptor kinase-like Gene Family AT5G65600 40.836 2.15e-59 204
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Mupr5409g00010 Pkinase 1.1e-23 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr5409g00010 - - qsa:O6P43_009469 378.252