Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr5409g00001 ATGCACCTCCATTTGTTATTCAAATGTCAATTAGCAGCAACCATCTTCATTATCATTGGCCTCACCAATGTTACATGTTTATATTTCAATTTCCCTACCTTCCAACCAAATGATGAAACTTATTTATTGCTGAGTGAGAATTCAAAAATATACTTGAATGCCATCCAAGTGACCCCAGATATTCGTGGTGACATACATAATTATTCTGGACGTGCCTTCTTTAACAAGCCATACAAACTTTGGAGCAAGAAGAAGAACCAAACTGCTTCCTTCAACACCACTTTTGTGCTCAACATAAATCCCCAAACTACCCCTGGTGGAGAAGGCTTGGCCTTTATCTTAACCTCAGACACCACTCTCCCACAAAACAGTGAAGGAGAATGGCTTGGTATTGTTAATGCTACTTCCAATGGAACCTCACAAGCTGGGATTCTAGCAGTGGAGTTTGACACAAGAAAAAGCTTCTCACAAGATGGCCCTGACAACCACGTTGGCATCAACATAAATAGCATCAACTCCATCCAACAGGTTCCACTAATCAACACTGGGATCAATATTTCATCGGCTTCAAATGTAACATTCAAAATTCAGTACTTCAATGACACAATATCAGTTTTTGGTTCCATGTTTGGAACTTCTATGGTGACCCTTTTGGTATCTCCACCTCTTAATCTATCTTCCTACCTTCATGAAGATGTTTTCCTTGGTTTCTCAGCCTCAACAAGTAACTTCACGGAGCTGAACTGTGTAAAAGCATGGGAATTCAGTGGTGTTGATATTGGAGATGAAAGTAGTAGTCTCGTGTGGCTTAAAGTCGCTGTTCCAATAGCGATTGTTGTTGTTATTATTATCATGGGAGGATTGGTGATATTTTTCTTGTGTTGGCAAAGGAAACGCCACATGGAGAGGCCAGAGGATGCATATCCAAGGATAGAGGACCAGATTCAGCATTCCTCTATGGCTCCAAAGAAGTTTAGGCTAAGGGAAATAACAAAAGCAACAGGTGGATTCACTCCTCATAACAAGCTTGGAGAAGGTGGGTTTGGAACTGTGTATAAAGGGTTATTGGAAAACAAGGAGGTGGCTGTGAAGAGAGTCTCCAAGAACTCACGGCAAGGAAAGCAAGAATTTTTGGCGGAAGTGACAACAATTGGAAGCCTTCACCACAGGAATTTGGTGAAACTCACTGGCTGGTGCTATGAGAATAGAGAGCTTCTCCTTGTGTATGAGTTCATGCCTAATGGAAGCCTAGACAAGTACCTCTTTGGTGACAGAATTTTTGGTAATAATGCCCTTGAAGAGGGGTGTTCTTTAACACTGAATTGGGAAACTAGGCACAGTGTGATTCATGGGGTGGCTCAAGCACTTGACTATCTCCACAATGGGTGTGAGAAGAGGGTGCTTCACAGAGACATAAAGGCCAGCAACATAATGTTGGACTCAGATTACAATGCCAAGTTGGGAGACTTTGGATTGGCAAGAACAATTCAGCAGAGAAATGAAACACACCATTCTACAAAGGAGATTGCAGGCACACCAGGGTACATGGCTCCAGAAACATTTCTGACTGGGAGGGCAACAGTGGAGACAGATGTGTATGCATTTGGGGTTCTTGTGTTGGAGGTTGTGTGTGGAAGGAGGCCAGGGAATGTGTATGCACAAGATGACTACAAGAACAGCATTGTGTATTGGGTGTGGGACTTGTATGGGAAGGGAAAAGTGGTTGTTGCTGTGGATGCAAGGTTGAAAAAGGAGGAGATTAAGAAGGAGGAAGTGGAAGGTGTTATTGTTCTTGGCTTGGCTTGTTGCCATCCAAACCCACACAAAAGGCCATCCATGAGGACTGTTCTTCAGGTTCTGAATGGGGAAGCAGCCCCACCAGAGGTGCCTAAGGAAAGACCAGCTTTTATGTGGCCTGCTGTGCCTCCATCATTCAAAGAAGCTGAAGATAGCTCCCTCATCCAGGGAACACTCACTCCATTCACTGAAATCACTGGCAGATGA 2004 0.4346 MHLHLLFKCQLAATIFIIIGLTNVTCLYFNFPTFQPNDETYLLLSENSKIYLNAIQVTPDIRGDIHNYSGRAFFNKPYKLWSKKKNQTASFNTTFVLNINPQTTPGGEGLAFILTSDTTLPQNSEGEWLGIVNATSNGTSQAGILAVEFDTRKSFSQDGPDNHVGININSINSIQQVPLINTGINISSASNVTFKIQYFNDTISVFGSMFGTSMVTLLVSPPLNLSSYLHEDVFLGFSASTSNFTELNCVKAWEFSGVDIGDESSSLVWLKVAVPIAIVVVIIIMGGLVIFFLCWQRKRHMERPEDAYPRIEDQIQHSSMAPKKFRLREITKATGGFTPHNKLGEGGFGTVYKGLLENKEVAVKRVSKNSRQGKQEFLAEVTTIGSLHHRNLVKLTGWCYENRELLLVYEFMPNGSLDKYLFGDRIFGNNALEEGCSLTLNWETRHSVIHGVAQALDYLHNGCEKRVLHRDIKASNIMLDSDYNAKLGDFGLARTIQQRNETHHSTKEIAGTPGYMAPETFLTGRATVETDVYAFGVLVLEVVCGRRPGNVYAQDDYKNSIVYWVWDLYGKGKVVVAVDARLKKEEIKKEEVEGVIVLGLACCHPNPHKRPSMRTVLQVLNGEAAPPEVPKERPAFMWPAVPPSFKEAEDSSLIQGTLTPFTEITGR 667
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr5409g00001 667 Gene3D Phosphorylase Kinase; domain 1 322 411 - -
Mupr5409g00001 667 Gene3D - 25 264 - -
Mupr5409g00001 667 CDD lectin_legume_LecRK_Arcelin_ConA 27 256 IPR001220 GO:0030246
Mupr5409g00001 667 ProSitePatterns Protein kinases ATP-binding region signature. 343 364 IPR017441 GO:0005524
Mupr5409g00001 667 CDD STKc_IRAK 343 622 - -
Mupr5409g00001 667 Pfam Protein kinase domain 339 618 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr5409g00001 667 SMART serkin_6 337 620 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr5409g00001 667 PANTHER - 59 630 - -
Mupr5409g00001 667 SUPERFAMILY Protein kinase-like (PK-like) 318 620 IPR011009 -
Mupr5409g00001 667 Pfam Legume lectin domain 27 259 IPR001220 GO:0030246
Mupr5409g00001 667 ProSitePatterns Serine/Threonine protein kinases active-site signature. 467 479 IPR008271 GO:0004672|GO:0006468
Mupr5409g00001 667 FunFam Probable L-type lectin-domain containing receptor kinase S.5 322 411 - -
Mupr5409g00001 667 SUPERFAMILY Concanavalin A-like lectins/glucanases 25 256 IPR013320 -
Mupr5409g00001 667 Gene3D Transferase(Phosphotransferase) domain 1 412 628 - -
Mupr5409g00001 667 FunFam probable L-type lectin-domain containing receptor kinase S.5 412 626 - -
Mupr5409g00001 667 ProSiteProfiles Protein kinase domain profile. 337 636 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr5409g00001 667 FunFam Probable L-type lectin-domain containing receptor kinase S.5 26 264 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr5409g00001 Mupr-Chr5409 2149 4152 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr5409g00001 29 636 Receptor kinase-like Gene Family AT5G55830 35.835 6.24e-121 374
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Mupr5409g00001 Pkinase 2.3e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr5409g00001 - - gmx:100785031 1143.64