Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr5394g00001 ATGGTAACGGTAAGAGCAGTGGACTATGAGTCAGAGGGAGAGATCAGATTCAGAACAATGAGCTTCGACAAGTGCAGAAATCTTGATGACTTGTATAAGCCTGAAGAGTTGGATGAGGTTATCACTGAAAAATCTACCAGCTCAAAGAGAAGGAAGGTGGGGAATCTGAAGCTGCAAACCACATTCTCCTTCAAATATCTACTTTCTGATAATTCTGCTTCAAAGGAGGAAGTTGATGGCTTGTTCAATGAACAAAGCCCCACAATTATGCTACCAAAACCCGAAATTTTGTTTTCACCAAAGTCCATTGGGGAGCTTGATGTGGCTGCAATAAAGCTGCAGAAGGTTTACAAGAGCTACAGGACTAGAAGAAATCTGGCAGATTGTGCAGTTGTTTGTGAGGAGCTATGGTGGAAGGCTTTAGACTATGCTGCTCTTAGCCGGTGTTACACATCACATTTTGGCTCTGGTAAATCAGAAACAGCTATTTCAAAATGGGCAAGAGCTAGGACCATGGCTGCTAAGGTGGGAAAGGGTTTGTGCAAAGATGATAAGGCGGAGAAATTAGCCCTAAGGCACTGGCTTGAAGCTATTGATCCACGTCATCGTTACGGGCACAATCTGCACTTATACTATGATGTTTGGTTTCATAGCCAGAGTTCACAACCTTTTTTCTACTGGTTGGATGTTGGAGACGGAAAAGAAGCAAATCTTGACGAGTGCCCAAGAAGTGAATTGTATAAACAGTGCATAAAGTATCTTGGACCCAAAGAAAGGGAAGGATATGAAGTGATTATTGAGGGAGGAAGGCTTATTTATAGAAAAAACCAGAACCTTGTACACACTGTCGAAGGATCTAAGTGGATTTTCGTTCTTAGCTCATCTAGAATTTTGTACGTTGGAGAGAAAAAGAAAGGCCACTTTCAGCACTCAAGTTTTTTATCTGGGGCTGCTACTATTGCTTCTGGAAGATTGGTTGCCCAAAATGGAGTTCTTGATGCTATATGGCCCTACAGCGGTCATTACTGTCCCACACAGAAGAACTTTATGGAATTCATTGGCTTCTTGATGGAACATAATGTGGACTTGACAAATGTAAAGAAGTATGCAATTGATGATGATATCCCACCTTCAAAACCTGCAGAGGAGGAGCTACAGTTTGAGTCCAAAAAGGCTAACATTAGTGACTTTGCCACTGCCAAAAATTGCAATCAAAATAATATGGGTCACTCCGGTGCCAATATGGAAAGTTCACAACTTAAAGAGAGCAAGAGCAAGCCATTGTCAAGAAAATGGACTACTGGAGCTGGTCCTAGGATTGGTTGTGTGAGAGAGTACCCTGCAAAACTCCAAGTTAAGGCACTTGAACAACTCAACCTATCTCCTAGAGTCAACCTTGGAAAAGTTGCTGCCAAGGCACCAATTCCCTCACCAAGGCCTAGTCCAAAAATCCACCTGTCCCCTAGGCTGCCAAGCAACACCAGCTTCAAACTCGCCTCAACTTCCACTTGCTGTTGCCACCTTGTCCTTTGCAAAAACGTGTTCTTTTCTCAAATGGGTGGTTCAGGAAGATGGCTTAAGTCGCTCATTTCCCTCAGAAGGCCCTCCACAAAAGATCAAGAGAAGAGCGGTGATAAGAGTAAGAGAAAGTGGAAGTTATGGAGGAGCAGTGCAGAAGGGTTTGTGATTGGATCATCCATGCAGAAGGGGCAGGGTGGTGGTGGTGCTTCCTTTGTGGTGGATGATGGAGCATTTGCTGCTGCTTTGGCTGCTGTGGTAAGAACTCCACTCAAAGACTTTATGGTGATCAAGCAGGAATGGGCTGCCATTCGAATCCAGGCAGTATTTCGAGGTTTCTTGGCAAGACGAGCTTTGAGGGCACTGAGGGCAGTGGTGAGGTTGCAAGCTATATTTCGTGGTTGGCAAGTGAGAAAGCAAGCAGCTGTTACTCTAAGATGCATGCAGGCGCTTGTGCGAGTTCAAGCACGTGTCAAGGCAAGGAGTGTGGGGAAGTCTCAAGAAGGGAAAGCTGTGCAGAAACTATTAAGCGAGCGCCACAATGAAGCTGATCCTGTTAAGCAGGCTGAGCAAGGGTGGTGTGACATTCCAGGAACTGTGGAAAAAGTTAAATCAAAATTACAAATGAGGAAGGAAGGAGCAATTAAGAGGGATAGAACGAAGGCATACTCTCAGTCTAAGCAGAAATTGACACCGAGTGCTAGTCCAAACCCAAGAGCTGATAAGTCAGTGATTCCTCTCAAGCACCGCAGCCTAGACAGCAAGAGCTCGGGATGGAGCATGTTAGACCGCTGGATGGCTGCAAAGCCATGGGAGAGCAGGTCGATGGAAGATATGTATTTGGACTCATCTAACATGACTCCAGTTACCAGTAAAAGTGATCATCTTGTTCTGAATGACTCAGTCAAACCAAGAAGGAATGGTGTGACAACGAGGATTTCAACTAAATCTCTTACAACCAGTCAATCAACTCCATCATCTTCGGCCATAAGCTCTGAATGCATGTATGATGATAGCCCTTTGTCAACTTCATCCACGTCCGGATCACCATCTGGACTGCCATCTGGACCATCTAACAACAATGTTATGGTGGAGGCAACAGAGGAAAGCAGTGTTTGTAAACCAAGCTACATGAGTTTGACAGCATCAACCAAGGCTAAATTGAAACCCTATAGATGTTTTTCTCAGAATTCAAAGAGAATCTTTATGGATGATTGTGTGTCACTAAGTGGAGTTACTAGAAGCAGTTCTGGTTCCTATCCTTCTGCTAATATGTGGAAGAATCTCTATGCAACACCTCTAAGGACAAATTATCAAAAACGATATACATTGGAAGAT 2856 0.4408 MVTVRAVDYESEGEIRFRTMSFDKCRNLDDLYKPEELDEVITEKSTSSKRRKVGNLKLQTTFSFKYLLSDNSASKEEVDGLFNEQSPTIMLPKPEILFSPKSIGELDVAAIKLQKVYKSYRTRRNLADCAVVCEELWWKALDYAALSRCYTSHFGSGKSETAISKWARARTMAAKVGKGLCKDDKAEKLALRHWLEAIDPRHRYGHNLHLYYDVWFHSQSSQPFFYWLDVGDGKEANLDECPRSELYKQCIKYLGPKEREGYEVIIEGGRLIYRKNQNLVHTVEGSKWIFVLSSSRILYVGEKKKGHFQHSSFLSGAATIASGRLVAQNGVLDAIWPYSGHYCPTQKNFMEFIGFLMEHNVDLTNVKKYAIDDDIPPSKPAEEELQFESKKANISDFATAKNCNQNNMGHSGANMESSQLKESKSKPLSRKWTTGAGPRIGCVREYPAKLQVKALEQLNLSPRVNLGKVAAKAPIPSPRPSPKIHLSPRLPSNTSFKLASTSTCCCHLVLCKNVFFSQMGGSGRWLKSLISLRRPSTKDQEKSGDKSKRKWKLWRSSAEGFVIGSSMQKGQGGGGASFVVDDGAFAAALAAVVRTPLKDFMVIKQEWAAIRIQAVFRGFLARRALRALRAVVRLQAIFRGWQVRKQAAVTLRCMQALVRVQARVKARSVGKSQEGKAVQKLLSERHNEADPVKQAEQGWCDIPGTVEKVKSKLQMRKEGAIKRDRTKAYSQSKQKLTPSASPNPRADKSVIPLKHRSLDSKSSGWSMLDRWMAAKPWESRSMEDMYLDSSNMTPVTSKSDHLVLNDSVKPRRNGVTTRISTKSLTTSQSTPSSSAISSECMYDDSPLSTSSTSGSPSGLPSGPSNNNVMVEATEESSVCKPSYMSLTASTKAKLKPYRCFSQNSKRIFMDDCVSLSGVTRSSSGSYPSANMWKNLYATPLRTNYQKRYTLED 952
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr5394g00001 952 Gene3D - 602 657 - -
Mupr5394g00001 952 ProSiteProfiles IQ motif profile. 605 633 IPR000048 GO:0005515
Mupr5394g00001 952 Pfam IQ calmodulin-binding motif 629 646 IPR000048 GO:0005515
Mupr5394g00001 952 Pfam IQ calmodulin-binding motif 109 125 IPR000048 GO:0005515
Mupr5394g00001 952 Pfam IQ calmodulin-binding motif 607 626 IPR000048 GO:0005515
Mupr5394g00001 952 MobiDBLite consensus disorder prediction 408 430 - -
Mupr5394g00001 952 ProSiteProfiles IQ motif profile. 629 656 IPR000048 GO:0005515
Mupr5394g00001 952 MobiDBLite consensus disorder prediction 408 422 - -
Mupr5394g00001 952 MobiDBLite consensus disorder prediction 791 867 - -
Mupr5394g00001 952 MobiDBLite consensus disorder prediction 711 730 - -
Mupr5394g00001 952 MobiDBLite consensus disorder prediction 711 762 - -
Mupr5394g00001 952 SMART iq_5 604 626 IPR000048 GO:0005515
Mupr5394g00001 952 SMART iq_5 105 127 IPR000048 GO:0005515
Mupr5394g00001 952 SMART iq_5 627 648 IPR000048 GO:0005515
Mupr5394g00001 952 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 589 647 IPR027417 -
Mupr5394g00001 952 PANTHER IQ DOMAIN-CONTAINING PROTEIN IQM3 49 484 IPR044159 -
Mupr5394g00001 952 MobiDBLite consensus disorder prediction 810 867 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr5394g00001 Mupr-Chr5394 2629 13446 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr5394g00001 519 936 IQD Protein Family AT1G72670 44.907 1.03e-87 285
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr5394g00001 - - cic:CICLE_v10027246mg 847.04