Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr5392g00001 ATGAAATTCCGTTGCCGGGACTTGAACCCGGGTCTCTCGGAGAAGCAGGGCGGCAGAACCTTGGGTCCAGAAAACATGACAAAGAGAACCAAGAAGGCAGGCATCGTCGGAAAATATGGTACCCGATATGGTGCTAGTTTGCGGAAGCAGATTAAGAAGATGGAAGTTAGTCAGCATAGCAAATTCTTTTGTGAATTTTGTGGAAAGTATGCTGTGAAAAGGAAGGCTGTGGGAATATGGGGGTGCAAGGATTGTGGTAAAGTAAAAGCAGGCGGTGCCTACACTTTGAATACTGCGAGTGCTGTCACTGTGCGAAGCACTATCCGGAGGTTGAGGGAACAAACTGAGGGTTGA 354 0.4802 MKFRCRDLNPGLSEKQGGRTLGPENMTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKFFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTEG 117
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr5392g00001 117 Pfam Ribosomal L37ae protein family 29 113 IPR002674 GO:0003735|GO:0005840|GO:0006412
Mupr5392g00001 117 Hamap 50S ribosomal protein L37Ae [rpl37ae]. 29 97 IPR002674 GO:0003735|GO:0005840|GO:0006412
Mupr5392g00001 117 SUPERFAMILY Zn-binding ribosomal proteins 35 107 IPR011332 GO:0006412
Mupr5392g00001 117 NCBIfam ribosomal protein eL43 26 116 IPR002674 GO:0003735|GO:0005840|GO:0006412
Mupr5392g00001 117 Gene3D - 26 117 IPR011331 GO:0003735|GO:0005840|GO:0006412
Mupr5392g00001 117 PANTHER ZGC:171772 22 116 - -
Mupr5392g00001 117 FunFam 60S ribosomal protein L37a 27 117 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr5392g00001 Mupr-Chr5392 1446 2831 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr5392g00001 26 117 Cytoplasmic Ribosomal Protein Gene Family AT3G60245 92.391 7.03e-59 174
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr5392g00001 K02921 - gmx:100499850 190.274