Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr5390g00001 ATGGAGAGCGCGTGGCAGAGGAAATGCGAATCACCGTTTCAGCCGTCGACGTCTGCGACGGTTTCGTCTGCACCGTCGCCGGAGCCGAAGGAGATCAATGCTAGCCATTATGTTTATCCGCAAGTTGCTCATGGTTTAAGATCAAAATTTGTTGGGGGAAAGCAAGGCCCAGTTTGCCCGAGCTTTCCCCACTCAACCACCCATGGATCTGGCCAAGCTGATGCTGGAAATTCATTTCTGGCTCTCCTTTATGGTCCTCAATCCTTGTTGCAGTGTGATTTCCAGGATTTGTCTGATCGCAAGCTTTGCACCTCATCTAGTGATTGTACTGCTGCTATTGGGAATTCTGCTGTTGATTCTATAGAAAGTGGAACCTTCCTAACATCCACTGTGGGGTTGATAACAGAAAATTTAATTAACCGTAACCGGCAAAGTTGGGCAAACACTTTTCCTGAGATATCTTCCAGGGCAATGGTTGGTCCGAATGGTGGTAGTAATTTTGTCTTCCATGATATTCAGAGTAGCTATACTGCTAACCAGTCCACAATTCCTGGTGGTGAGAAAGCAAGGGAGTCTTTTTCTTCTCCAGGTCAATGCCGAGGTACAAGCCCGGCATTTAGTCTAAATGTTTGCTGCTCAGATAATCAAACTACACCAAATATGGCTTTAGAACGGTACTCATCTAAGCATTCAACTCCTTTTATTAGTGGGTATCCTCGAGTGTTCTGCTTGGGAAAAAGTGGCTATCTTCTTCTTAGCAATACAGGGCTTCTTGGTATTGTTTGCTCATGCCATTGTTGGCACATGTCTGTTCGTAAGTTTTGCGAGCATTCAGGATTACATGGCGTCAACCCAGGGGATGCTGTTTGTATGGAAAGTGGTGAGACCATTTTGCATTGGCAAAAGCAATACTTCTTGAAACTTGGGATTAGGTTTCCGGGGAATGAGAGTGAATGGGACTGGCCAGAAGTATTATCAACAACAGGCAGTCTGATGAAATCCAATGCATCTGCGTTTGATATGTCCAAGACCGATTTGTCTCATATTTTGAGTTCATCTGCAGTCATGTTAAGGTCTGGAAAGTCTTCCGACTATATTATGTTTCCAAAAAATGCTGATACGAACCACAATTTATTTATTGGTGCATTGTCCAGAAAACAACCAACAACAATCCAGGATGGTTGCAACAGTCCACTCAAAGGTTTTACTGGTATTTCACAAAGCAGCTTGTACGATCAGTTGAAAAACCAGTTAATGGAATCTAATCTGGCTATGTATACAACTGCACCAAATGCTGTTGAAACTCAACTAGATGATGGTTGTCAGCCTATACCTCCTTTCCTTGATTCTCTGAAAAGGACAGGAAATTTGTCAACTATCCACTCTCCTTTGCAAACTCCAGCAAGCCTTTTGAAAGACCATGATTGCATCAAAAAGAAGAATACGAAGGATGGTCTTGTAGGCAGAGATGCAGCTTCCTCCAATATTGAGCTTAGGCTTGGTCAACCACCTCAGACAGGAAATCCACTTCCATCATTTATAGAACCACTGCTGTTTAATGCCCTTGCCAGTCCTCCAAAATTGCAACCTCTGAAGCAGACTATTAATAACCTCAGCAGGGAGGAGGAATTACAGAGTAGTTTTAGCTATGCTGCTGGTCCATTCGAAATGGTTGAAGAACAGCCTCAATATAAACCCAGGAACTATATGTTTGCTGTTACTAATGCTTCAGGTGCTGCTAGAGCTAGATCAGAAACGAAAAATGTGGCCAAGGGTTTATCATTTTCACCATTTACACAATTTGATAATCAACCCAAGGGAAAGACAAAAGTTGGTGAAAGTTTCAGGAATGATGACAGGCCTATCATGCCCAAGAAACTGCATTCTGATTTTAGTAACATGCAGTTTAGTTTTACTAATGTCCCCTGGAATAGTAGTGGTCACACAGGAAGGCAATCAGATAATTCTGGCCTAGAGACCAATAAATATTTGGACTATCATAAAGGGGTGAGCTTTGCTAAAGACTCTGGTGCCAAAATAAATTCTGGATTTGGAATTGGTCAGTTAATGGAATATGCAAGCTCCATCTCGAGAGCTGGTTGTGGTAGTGATAGCTGTACTTCGGTTATTAATGGAAAGATATATCAATCAAATTACGAATCAAGCTTGCCATCAGATACATCTGCAGGTGCAAATATTTTGCATGGTTCAAACAATGTATCTTCTCTTGGACAGGAAAATCACGTGACTCCAGAGACATCCATTCCATTTGAAGAAAATTTGAAAGGCCTTCCCTATCTTGTTTCAAGTTCTGTGTCCAATCAGACTCCTACTTTACCACCACAGCAGGGCATTAATATGGATGCTTATTTGCTTGATGAAAATATGAGGTTGCTTGCATTGACACAGATACTGGAGTTATCTAAGCAACAACATGCATTGTATTTTCATGATATGAATCAAAAGCAAGGGAGTTCCAGCAATATTTCAAAACTTCAGCATTATATGTATGAGGCTTCAACATCTGAACAGGGCATTTCTGGTGCATCATTGAAATTGCCCCCAAATAGAGGGACTTGCGGCAATCCTGAGAGTACTGTTGGATTAGAGAAACTGGCTTCCTTCACAGGCAAGCATAATGCATTCTTTTATTTTCCCCAATTTTTAATGGTGTGTTTAGAATATTGTCAATTGTCTGGCCCTGTACCAATACCTTTACATTCTAAAGAGAAGGAATCACAATGTAAACTTTCCTTTGATCTTCGAAATGAAGAGCCTTCTTTAAGCCTTGGAATTAACAAAGAGAATACCAGATCAAGTGCAGGTGAAAAATGCTCTGAGCAACCATCAAATATATGTTTGGGAGGCAAGTACCCTTGTGCATCTTGGATAAACTGTTGCAGAAGCAATTTTTTCTCAGGAATTGAACCCCCTTGTCATAACTCAAAGCAACAACTTGCAAATGCCAGTGGTGAAACTTCTTTGAAGGTCGCTTCAAATTTGAGTAGAGATCTGAATACTTCAAAGGATGAAAATATCCACTTTGAGCAAGGTGGGAAGTTAGATGGCCAAAACTCAACCAAAGTTGGCTTTCATGCACCTCAGTGGAGAGATGTGCCGAGTAAGGTCAGGAAAGCAGTTTGTGATGCAACATCTTTAGATCAGACAGCTACTGGTTTGGATTGGGAAGGACAAGACGGTGTTCAACTTGGAAACATTTCTATGAAACGCTTCAAAAGAGCTATTGATACGGGAGACATGTCGAAAGAGCAAGAAAATTCTAATGTTTCTTCTGGATGCTCTGCTCCTGTGGTTACTCAGGCATCTGTTGAGGTCAACAAAATTGATTCCTGTACTGATGATGCTGTAGACAGTGGCTTTGTCAACAACCTTGTAGTTGATGAAGGGTCAGGAATTGAGCAAGGCTCGTCGTCAGATTTGGTTGAAAGTGAAAGAAGTGATGAGTTTCTACGCTTGACTTATGGGAGTTACTTGAAAAATGGTTATCTTAGAGTCTTAAATGATCAACCATGTCACAATCTCCTTGATGACCTTAAACTGTTAGATTCCTTGATATGGAAGAAAGGACGGAATCAAAAAAATCATTTTGTGCTTTCTGCTAATTGTAAAACCAATCAATCTCAAAAAGTCAAGAAGGGCCTCAAAGGAAAAAAGCGAATGAGAAATGAGGTGAGGATTCTAGATGCTTCATTATCTTCTGGATTCCCTTCCTTATTGCATGAAAAGAATGGTGAAGGTGCTGGAATTTTTAATTCCTCTTCTAGTTTGTCAAAAGAAATGCAAATGCACTCTTTGTCCAGCCTGCAAAAATCATCTAACAAGTCTTCCTTTGTTCAACCTAGTAACAAACAAAGGCACTCTGCATTTTCATCCAAATTTATTTCTTCTAAGAATCATCTGACCAAGCATCACAGTTACAAAGTTGGCTATGAGTCAGAATCAAATTCTGATGCTGAGTTTTACACATTGCCTGGTGTTGCTGGAACAAAGAAATTAAAAAAGGATCTCTCTTCTGATTGTTTTGAGCAATTTCAAATGCAAGAACCAGTCTATGAGGAACCTGAAAATGCAAAGTTGAGGCCATTCTCTTGCATGAAGAAAAATGCTCATAGAATCACAAGGCCAGTAGTGTGTGGAAAATATGGTGAAATATCTAATGAGCAGTTGGCTAGAGAGGTGCAAAAACCAGCAAAAATTGTCTCTCTCAGCAAGGTTCTTAAAACTTCCGAAAGATGTATGGGCCATCCAAATGGGAAACCTAGACTAACTTCAAAAAAGAAATGGAAGAGATTGAGCATTGGATCAAGTAGTGGGCACTGCTTCGGGAACCATGGTTTAAAAATTAAGGAAGATAATGAAACCCAAAATACAATAATTTGTAATGAAACAAATGTTGATGTGTCTATGGAAGATTTGGATAAGGGTGATAAGCCACGTGTTGTTTACAAAGGGAGGAAAGATGCCAAAGCCAAGAAGGGTGATTGTGTAGGAAATAGAGCTGATGCTCCATTCAAGGTGAAGAGCAAGGAAATTCAGAAACAGCGTAGCATTAATGAACTCACTGCTATAGAAACCAAAGTGATGGATATGATGAATTGTGCTGAAGATAGGGAGCATGGTTTGTGTAGCACAAAAAGTAGAATCTCTATTCAAGGTCACACAAGCATATCCATCATAAATTCAGATGCTTTCTGCTGTGTGTGTCAAAGCTCAAGCAATGATAAAACCAACTGTTTATTGGAGTGTAGTCGATGCCTAATTAGAGTGCATCAAGCTTGCTATGGTGTTTCCACATTACCCAAAAAAAGCCGTTGGTGTTGCAGGCCATGCCGAGCAAACTCAAAAGATATTGCTTGTGTCCTATGTGGTTATGGAGGTGGAGCCATGACTCGAGCGATAATGAGTCATACAATTGTGAAAAGCCTCCTGAAAGTGTGGAATGGTGAGAAAGATGGCATGCCTAAGCATACAACATCACGTGAAGTTTTTGAAAAGGAAATAGATGCATTTCCATCCTCAAAATCTGGACTAAAAGTTGATAAAAAAAGTGTTTTGAAGTCCAAAGTTGTTGATACATCAACAACAGATTTGATGGAACTTCAAATGTCTACAAATCACATACAACACAACCCTACCTCTGTTTCTAATTTCAAGATACCTAACAGCATTACAGCAGGAGTTCTTGATCCAACTGTTAAACAATGGATTCATATGGTTTGTGGGCTTTGGACGCCAGGAACAAGATGCCCCAATGTTGATACCATGAGTGCTTTTGATGTATCTGGTGTTTCACGTCCAAGGGCAGATGTGGTTTGTTCCATTTGCAATCGACGGGGAGGTTCTTGTATAAAGTGCAGGATTGCTGATTGCTCTGTCAAGTTTCATCCTTGGTGTGCTCATCAGAAGAACCTGTTGCAAAGTGAAACTGAAGGTATTGATGATGAGAAGATTGGATTTTATGGAAGATGCATGCTTCATACTGTTGAAACTAGATGTCTGTCCATATATGATCCTATTTATGAAATGGGCAGTCAAGAAGAAAAGGAATTTACCTGTGCCAGGGCAGAGGGTTACAAGGGCCGTAGATGGGATGGTTTTCAGAATAATCACTGCCAAGGTGGATGCCTTGTTCCTGAGGAGCAGCTAAATGCTTGGATTCACATTAATGGGCAGAAATTATGTTCACAGGGACTCCCAAAATTCCCAGATTTAGATATTGAGCATGATTGTCGAAAGGAATATGCTCGGTACAAACAAGCAAAGGGTTGGAAACACCTTGTTGTATACAAGTCCCGTATACATGCCCTTGGTCTTTACACTTCTCGATTCATTTCCCGGGGTGAAATGGTTGTTGAGTATATTGGTGAAATTGTGGGGCTGCATGTAGCTGACAAAAGAGAAAAGGAATATCAATCTGGAAGGAAACTACCGTACAAGAGTGCCTGCTACTTCTTCAGGATAGACAAAGAGCATATTATTGATGCCACAAGGAAAGGGGGAATTGCTCGATTTGTTAACCACTCATGCCTGCCAAATTGCGTGGCAAAAGTGATTACTGTAAGGCATGAGAAGAAGGTTGTCTTCTTTGCAGAGAGGGACATATTTCCTGGTGAAGAGATTACGTATGATTACCACTTTAACCACGAAGACGAAGGAAAGATTCCATGTTACTGCAATTCAAAAAATTGCAGGCGCTATATGAACTGA 6228 0.4064 MESAWQRKCESPFQPSTSATVSSAPSPEPKEINASHYVYPQVAHGLRSKFVGGKQGPVCPSFPHSTTHGSGQADAGNSFLALLYGPQSLLQCDFQDLSDRKLCTSSSDCTAAIGNSAVDSIESGTFLTSTVGLITENLINRNRQSWANTFPEISSRAMVGPNGGSNFVFHDIQSSYTANQSTIPGGEKARESFSSPGQCRGTSPAFSLNVCCSDNQTTPNMALERYSSKHSTPFISGYPRVFCLGKSGYLLLSNTGLLGIVCSCHCWHMSVRKFCEHSGLHGVNPGDAVCMESGETILHWQKQYFLKLGIRFPGNESEWDWPEVLSTTGSLMKSNASAFDMSKTDLSHILSSSAVMLRSGKSSDYIMFPKNADTNHNLFIGALSRKQPTTIQDGCNSPLKGFTGISQSSLYDQLKNQLMESNLAMYTTAPNAVETQLDDGCQPIPPFLDSLKRTGNLSTIHSPLQTPASLLKDHDCIKKKNTKDGLVGRDAASSNIELRLGQPPQTGNPLPSFIEPLLFNALASPPKLQPLKQTINNLSREEELQSSFSYAAGPFEMVEEQPQYKPRNYMFAVTNASGAARARSETKNVAKGLSFSPFTQFDNQPKGKTKVGESFRNDDRPIMPKKLHSDFSNMQFSFTNVPWNSSGHTGRQSDNSGLETNKYLDYHKGVSFAKDSGAKINSGFGIGQLMEYASSISRAGCGSDSCTSVINGKIYQSNYESSLPSDTSAGANILHGSNNVSSLGQENHVTPETSIPFEENLKGLPYLVSSSVSNQTPTLPPQQGINMDAYLLDENMRLLALTQILELSKQQHALYFHDMNQKQGSSSNISKLQHYMYEASTSEQGISGASLKLPPNRGTCGNPESTVGLEKLASFTGKHNAFFYFPQFLMVCLEYCQLSGPVPIPLHSKEKESQCKLSFDLRNEEPSLSLGINKENTRSSAGEKCSEQPSNICLGGKYPCASWINCCRSNFFSGIEPPCHNSKQQLANASGETSLKVASNLSRDLNTSKDENIHFEQGGKLDGQNSTKVGFHAPQWRDVPSKVRKAVCDATSLDQTATGLDWEGQDGVQLGNISMKRFKRAIDTGDMSKEQENSNVSSGCSAPVVTQASVEVNKIDSCTDDAVDSGFVNNLVVDEGSGIEQGSSSDLVESERSDEFLRLTYGSYLKNGYLRVLNDQPCHNLLDDLKLLDSLIWKKGRNQKNHFVLSANCKTNQSQKVKKGLKGKKRMRNEVRILDASLSSGFPSLLHEKNGEGAGIFNSSSSLSKEMQMHSLSSLQKSSNKSSFVQPSNKQRHSAFSSKFISSKNHLTKHHSYKVGYESESNSDAEFYTLPGVAGTKKLKKDLSSDCFEQFQMQEPVYEEPENAKLRPFSCMKKNAHRITRPVVCGKYGEISNEQLAREVQKPAKIVSLSKVLKTSERCMGHPNGKPRLTSKKKWKRLSIGSSSGHCFGNHGLKIKEDNETQNTIICNETNVDVSMEDLDKGDKPRVVYKGRKDAKAKKGDCVGNRADAPFKVKSKEIQKQRSINELTAIETKVMDMMNCAEDREHGLCSTKSRISIQGHTSISIINSDAFCCVCQSSSNDKTNCLLECSRCLIRVHQACYGVSTLPKKSRWCCRPCRANSKDIACVLCGYGGGAMTRAIMSHTIVKSLLKVWNGEKDGMPKHTTSREVFEKEIDAFPSSKSGLKVDKKSVLKSKVVDTSTTDLMELQMSTNHIQHNPTSVSNFKIPNSITAGVLDPTVKQWIHMVCGLWTPGTRCPNVDTMSAFDVSGVSRPRADVVCSICNRRGGSCIKCRIADCSVKFHPWCAHQKNLLQSETEGIDDEKIGFYGRCMLHTVETRCLSIYDPIYEMGSQEEKEFTCARAEGYKGRRWDGFQNNHCQGGCLVPEEQLNAWIHINGQKLCSQGLPKFPDLDIEHDCRKEYARYKQAKGWKHLVVYKSRIHALGLYTSRFISRGEMVVEYIGEIVGLHVADKREKEYQSGRKLPYKSACYFFRIDKEHIIDATRKGGIARFVNHSCLPNCVAKVITVRHEKKVVFFAERDIFPGEEITYDYHFNHEDEGKIPCYCNSKNCRRYMN 2075
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr5390g00001 2075 MobiDBLite consensus disorder prediction 1 29 - -
Mupr5390g00001 2075 Gene3D SET domain 1840 2075 IPR046341 -
Mupr5390g00001 2075 Pfam PHD-zinc-finger like domain 1739 1814 - -
Mupr5390g00001 2075 ProSiteProfiles Zinc finger PHD-type profile. 1569 1620 IPR019787 -
Mupr5390g00001 2075 ProSiteProfiles SET domain profile. 1931 2052 IPR001214 GO:0005515
Mupr5390g00001 2075 Pfam SET domain 1944 2051 IPR001214 GO:0005515
Mupr5390g00001 2075 ProSiteProfiles Post-SET domain profile. 2059 2075 IPR003616 -
Mupr5390g00001 2075 CDD SET_SETD1-like 1933 2071 - -
Mupr5390g00001 2075 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1723 1834 IPR013083 -
Mupr5390g00001 2075 SMART PHD_3 1571 1618 IPR001965 -
Mupr5390g00001 2075 SMART PHD_3 1778 1834 IPR001965 -
Mupr5390g00001 2075 ProSiteProfiles Extended PHD (ePHD) domain profile. 1720 1834 IPR034732 -
Mupr5390g00001 2075 Pfam Tify domain binding domain 257 304 IPR032308 -
Mupr5390g00001 2075 MobiDBLite consensus disorder prediction 596 620 - -
Mupr5390g00001 2075 MobiDBLite consensus disorder prediction 1268 1290 - -
Mupr5390g00001 2075 SUPERFAMILY FYVE/PHD zinc finger 1566 1622 IPR011011 -
Mupr5390g00001 2075 CDD ePHD 1741 1824 - -
Mupr5390g00001 2075 SMART set_7 1931 2058 IPR001214 GO:0005515
Mupr5390g00001 2075 Pfam PHD-finger 1583 1618 - -
Mupr5390g00001 2075 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1558 1630 IPR013083 -
Mupr5390g00001 2075 MobiDBLite consensus disorder prediction 9 29 - -
Mupr5390g00001 2075 PANTHER HISTONE-LYSINE-N-METHYLTRANSFERASE 2 KMT2 FAMILY MEMBER 768 2075 - -
Mupr5390g00001 2075 SMART PostSET_3 2059 2075 IPR003616 -
Mupr5390g00001 2075 SUPERFAMILY SET domain 1895 2071 IPR046341 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr5390g00001 Mupr-Chr5390 1620 20430 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr5390g00001 1933 2071 C2H2 Transcription Factor Family AT2G23740 34.591 4.40e-17 86.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Mupr5390g00001 SET 2.2e-17 No_clan