Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr5372g00003 ATGGTATATCCTTTGGCCACCAACCGGGCTTTGAGGCGATCAACTGTGCTGTTAGGTCCAACTTTAATAGCAAATACCCACTTACAACCAATTGCCTTCTTGCCTGAGGGAAGAGAAACTAGCTTCCAAGTACTACTTTGTTCTAACGCCTGCATTTCAACTATCATGGCTTGTCGCCATCCAGGATGGGCAAGTGCTTCACAAACAGATTTAGGAATAGAACCTACTCATGGTGAATCTTATGTAGAAATAAATGTGATGGCAGAACCTGATCCCAATGATGTGGTTACCACACCAAAATTATCTACACTGCAAACTGATGAGCCAGATCCTGATGATCAAGAATTTCAGAGGATAAATGATACAACAACTGCTGTTTGTAACCGTTTGTGGAAGGCTCTGGAAATGCTAAGAAGTGAAGATAGTGCAATGCAGGCTACTTCAATCCTCCAAACTCTCCTGAAAATAATTAGGAATGTGATTGAACACCCTGAGGTGGAAAAATACAAGAGATTACGGATGGCTAATCCAGTCATTAAGAGGAATATTGTAAATAATAAAGCTGCCTTGGAAATTCTATTTTTGGTTGGCTTCAGCGAAGATGTTATGTTTGACCATCTTGGGAAGGAAGATGCTTACTTGGTGTTGAAGCGGAATGATCCTGGCTTATTGTGGCTAGCTAAGTCAACCCTCGAATCAAACACAAGCTTAACTTGCTAG 720 0.4125 MVYPLATNRALRRSTVLLGPTLIANTHLQPIAFLPEGRETSFQVLLCSNACISTIMACRHPGWASASQTDLGIEPTHGESYVEINVMAEPDPNDVVTTPKLSTLQTDEPDPDDQEFQRINDTTTAVCNRLWKALEMLRSEDSAMQATSILQTLLKIIRNVIEHPEVEKYKRLRMANPVIKRNIVNNKAALEILFLVGFSEDVMFDHLGKEDAYLVLKRNDPGLLWLAKSTLESNTSLTC 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr5372g00003 239 CDD PUB_WLM 133 232 - -
Mupr5372g00003 239 Gene3D - 131 231 - -
Mupr5372g00003 239 PANTHER ZINC METALLOPROTEINASE-LIKE PROTEIN 70 234 - -
Mupr5372g00003 239 SUPERFAMILY PUG domain-like 123 237 IPR036339 -
Mupr5372g00003 239 SMART PGNneu 148 217 - -
Mupr5372g00003 239 Pfam PUB domain 146 222 IPR018997 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr5372g00003 Mupr-Chr5372 9825 16438 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr5372g00003 142 198 C2H2 Transcription Factor Family AT2G01650 35.088 2.08e-06 46.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr5372g00003 - - gmx:100784039 301.212