Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr5362g00001 ATGAGCTCACCCTCAAACAAGAAACCCTCCTCCTCCTTTTCTTCTTCTCCTCCTTCACTGCTGAAGCTATTCGGCTTCCCTTTGACAACTACAAGCAGTGACGAGGCTCCTGGTGACAATGATGGCAACCATGGTAAGAAAATCGAGTGTCCATTTTGCCACCGTGAATTCCAAAATTTGCAAGCATTAGGTGGCCACCAAAATGCACATAGGAGAGAAAGACAAATGGCTAGGCTAGCCCAAATTGAATATACGAGTCTACAGCAAAGAAGCCAAATATTCCAAGCGCTTACACCTCTTGTGGTTGCACAAGGATCATCACCAACCTCTAATTTCAGTGGTGCAACTCAGTTTTGTATAACACTTGAATCATCGCAAAAACTACTTGTGGCGGAGCCACCAGGTATGCGCCACCGTAACATTTCCCCTATTGTTCAAGTACCAGTAGTAGGGGTTGATGTTGATGATAATATCGATCTAGAATTGAGACTAGCTACCTCTTCTAAGGAATCTGGGATGTGA 522 0.4444 MSSPSNKKPSSSFSSSPPSLLKLFGFPLTTTSSDEAPGDNDGNHGKKIECPFCHREFQNLQALGGHQNAHRRERQMARLAQIEYTSLQQRSQIFQALTPLVVAQGSSPTSNFSGATQFCITLESSQKLLVAEPPGMRHRNISPIVQVPVVGVDVDDNIDLELRLATSSKESGM 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr5362g00001 173 SUPERFAMILY beta-beta-alpha zinc fingers 46 76 IPR036236 -
Mupr5362g00001 173 ProSitePatterns Zinc finger C2H2 type domain signature. 50 70 IPR013087 -
Mupr5362g00001 173 Pfam C2H2-type zinc finger 49 73 - -
Mupr5362g00001 173 MobiDBLite consensus disorder prediction 24 43 - -
Mupr5362g00001 173 MobiDBLite consensus disorder prediction 24 38 - -
Mupr5362g00001 173 ProSiteProfiles Zinc finger C2H2 type domain profile. 48 75 IPR013087 -
Mupr5362g00001 173 PANTHER ZINC FINGER PROTEIN 5 10 167 IPR044299 GO:0010090
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr5362g00001 Mupr-Chr5362 3687 4208 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr5362g00001 19 103 C2H2 Transcription Factor Family AT1G67030 46.739 1.20e-16 72.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr5362g00001 - - ccaj:109793205 171.014