Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr5361g00007 ATGGGAGGGTATAATAATACTTGTTCTGCTAATAGCAAAATGGTAGAAGGCGTTGATGTCTTAGCTCGTGATTCTAGCATTAATGGAACAATGAAACCTTTGCCTGAGGATTTGGATTCCACGGCATTTATACAAGAACACGTGCCACTCATAATTGGAGAGAATGGCATTGGCAATGGGGAGACTAAGAACGGGACAGAAAATGGGGAAAGAGAGATTGTACTGGGAAAAAATATTCATACCATGTGCCTGGAAGTCATGGAGCCTGATATAGATGATGAGGTTACTGGGGAAAGGGAAGCTTATATGGCAAGTGTCTTGGCTCGATACAGAAAATTTCTCATAGAAAGGACCAACTATCATTTAGTTAGGTCTATGTCATCTACTGATCTTTATGAAAAATCTATCACAGGTTATCCCTATAATTTGGATTTTGACTATGGTGCACTGTCTCAACTTCAGCACTTTTCCATCAACAACCTGGGAGATCCGTTTATTGAAAGCAATTATGGTGTCCACTCCAGGCAGTTTGAAGTTGGTGTTTTGAACTGGTTCGCCCGGTTGTGGGAACTGGAAAAAGATGAGTACTGGGGCTATATAACAAACTGTGGCACTGAAGGCAATCTCCATGGCATCCTAGTTGGGAGAGAGGTGTTACCAGATGGGATTTTATATGCCTCACAGGAGTCACATTATTCTGTCTTCAAAGCTGCTCGTATGTACCGAATGGAATGTGTGAAGATTAATACTCTTTATTCTGGTGAGATTGACTGTGATGATTTCAAGGCCAAGCTTCTTTGTCACAAGGACAAGCCAGCAATAGTGAATGTCAACATAGGCAAGTTTCTCCTTCTCTCCTCTAAACTTGAAGAAGCAGGATTTTCACATGACAGGTTCTACATCCATTGTGATGGAGCATTGTTTGGTCTCATGTTGCCTTTTGTTAAACGTGCTCCAAAAGTTTCTTTCAAGAAGCCTATAGGCAGTGTGAGTGTCTCAGGCCACAAATTCGTGGGGTGCCCCATGCCCTGTGGCGTGCAGATAACACGATTGAAGCATGTGAAGAGTCTTTCGAGGAACGTAGAATACCTTGCTTCGAGGGACGCAACAATCATGGGAAGCAGGAACGGGCACGCTCCCATATTCCTGTGGTATAGTTTAAACAGGAAAGGGTACAGGGGCTTTCAGAAAGAGGTTCAGAAGTGCTTGAGGAATGCGCATTACTTAAAGGATCGCCTTCTAGATGCTGGGATTGGTGCCATGCTTAATGAGCTCAGCAGCACCGTTGTGTTTGAGAGGCCCCATGATGAGGACTTTGTGCACAAGTGGCAGTTGGCATGCCAAGGGAACATTGCACATGTTGTCGTCATGCCTAATGTTACCATACAGAAACTTGATCACTTTCTAAATGAACTTGTGCAGAAGCGTGCGCTCTGGTTTCGAGATGGGAACACTCAACCTTATTGTATAGCTTCTGCGGTAGGACACAAAAATTGCCTTTGTCCCCTGCATAGGTCATTCTGA 1524 0.4383 MGGYNNTCSANSKMVEGVDVLARDSSINGTMKPLPEDLDSTAFIQEHVPLIIGENGIGNGETKNGTENGEREIVLGKNIHTMCLEVMEPDIDDEVTGEREAYMASVLARYRKFLIERTNYHLVRSMSSTDLYEKSITGYPYNLDFDYGALSQLQHFSINNLGDPFIESNYGVHSRQFEVGVLNWFARLWELEKDEYWGYITNCGTEGNLHGILVGREVLPDGILYASQESHYSVFKAARMYRMECVKINTLYSGEIDCDDFKAKLLCHKDKPAIVNVNIGKFLLLSSKLEEAGFSHDRFYIHCDGALFGLMLPFVKRAPKVSFKKPIGSVSVSGHKFVGCPMPCGVQITRLKHVKSLSRNVEYLASRDATIMGSRNGHAPIFLWYSLNRKGYRGFQKEVQKCLRNAHYLKDRLLDAGIGAMLNELSSTVVFERPHDEDFVHKWQLACQGNIAHVVVMPNVTIQKLDHFLNELVQKRALWFRDGNTQPYCIASAVGHKNCLCPLHRSF 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr5361g00007 507 Gene3D Aspartate Aminotransferase, domain 1 381 476 IPR015422 GO:0003824
Mupr5361g00007 507 SUPERFAMILY PLP-dependent transferases 134 474 IPR015424 -
Mupr5361g00007 507 Gene3D - 170 376 IPR015421 GO:0003824
Mupr5361g00007 507 ProSitePatterns DDC / GAD / HDC / TyrDC pyridoxal-phosphate attachment site. 329 350 IPR021115 GO:0016831
Mupr5361g00007 507 Pfam Pyridoxal-dependent decarboxylase conserved domain 223 423 IPR002129 GO:0016830|GO:0019752|GO:0030170
Mupr5361g00007 507 PANTHER - 63 505 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr5361g00007 Mupr-Chr5361 28470 32382 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr5361g00007 284 411 Calmodulin-binding Proteins AT1G65960 28.571 2.94e-06 47.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr5361g00007 K25193 - gmx:100792053 841.262