Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr5361g00001 ATGCCAGTGTTTTCTCTTCTGTGTTTGGCTTCGATATATGAGTCCACTTGTTTTCGTTCGACATTCCTCACTGTTTTCTCGGGGAACCAAACGAAACCGAAACGGGCGTTCCCCCAAAATGTGCATTTGCCTTTTATTTCGCTCGCATCTCAGTGTCATTTAGCATGCGTCACCGAATATAAAGCTCAACTGAAACTCTTCGCCCAAAGCTTCCAGCTACTCTGCTGCTTCTGCTTCTGCTTCTGCACTGAACCTCAACAATCTTCGATCTATTACGTGTCAGCCACCTTGCGTTTTGTTACTAGAAGGGACGCCTCTTCTGCGGTTATAAAAAAAATGGCTGATGCTGAAGACATTCAACCGCTTGTTGTTGACAATGGAACTGGAATGGTCAAGGCTGGTTTTGCAGGTGATGATGCCCCAAGGGCTGTGTTCCCCAGTATTGTAGGGCGACCTCGTCACACAGGTGTTATGGTTGGGATGGGTCAGAAGGATGCTTATGTGGGTGATGAAGCCCAGTCAAAAAGGGGTATACTCACGTTGAAGTACCCCATAGAGCATGGGATAGTTAGCAACTGGGATGATATGGAAAAGATTTGGCATCACACATTTTACAATGAACTTCGCGTTGCACCTGAAGAACACCCTGTGCTTCTTACTGAGGCGCCACTCAATCCTAAGGCCAACAGAGAGAAGATGACCCAAATTATGTTTGAAACTTTCAACGTGCCTGCCATGTATGTTGCCATTCAGGCTGTTTTATCTCTGTATGCTAGTGGACGCACAACAGGTATTGTGCTTGATTCTGGTGACGGTGTGAGCCACACAGTGCCCATATATGAAGGGTATGCACTTCCTCATGCTATCCTTAGGTTGGATCTTGCTGGCCGTGATTTAACAGAATACTTGATGAAAATTCTAACTGAGAGAGGATACTCTTTTACCACCACTGCTGAACGGGAAATTGTACGAGATGTGAAGGAGAAATTAGCTTATGTGGCCCTTGATTTTGAACAAGAAATGGAGACTGCAAAGAGTAGTTCTGCAGTGGAGAAAATTTATGAGTTACCTGATGGACAGGTCATTACAATAGGGTCTGAGAGATTCCGCTGCCCAGAAGTTCTCTTCCAGCCTTCTCTAATTGGTATGGAAGCTACTGGAATCCATGAAACCACATACAACTCCATCATGAAATGTGATGTTGATATTAGGAAGGATCTTTATGGAAATGTTGTGCTTAGTGGTGGCTCAACTATGTTTCCTGGTATTGCTGATCGAATGAGTAAAGAAATCACTGCTCTTGCTCCTAGCAGCATGAAGATTAAGGTGGTGGCACCTCCTGAGAGGAAGTACAGTGTCTGGATTGGTGGGTCTATCTTGGCATCACTTAGCACCTTTCAACAGATGTGGATTTCCAAGGGTGAATATGATGAATCTGGTCCTGCTATCGTTCACCGGAAATTTTGTGAATGA 1473 0.4474 MPVFSLLCLASIYESTCFRSTFLTVFSGNQTKPKRAFPQNVHLPFISLASQCHLACVTEYKAQLKLFAQSFQLLCCFCFCFCTEPQQSSIYYVSATLRFVTRRDASSAVIKKMADAEDIQPLVVDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTEYLMKILTERGYSFTTTAEREIVRDVKEKLAYVALDFEQEMETAKSSSAVEKIYELPDGQVITIGSERFRCPEVLFQPSLIGMEATGIHETTYNSIMKCDVDIRKDLYGNVVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKGEYDESGPAIVHRKFCE 490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr5361g00001 490 FunFam Actin, muscle 294 385 - -
Mupr5361g00001 490 Pfam Actin 117 488 IPR004000 -
Mupr5361g00001 490 SUPERFAMILY Actin-like ATPase domain 261 488 IPR043129 -
Mupr5361g00001 490 FunFam Putative actin-related protein 5 453 481 - -
Mupr5361g00001 490 Gene3D Actin; Chain A, domain 4 294 385 - -
Mupr5361g00001 490 ProSitePatterns Actins signature 1. 167 177 IPR004001 -
Mupr5361g00001 490 Gene3D - 122 483 - -
Mupr5361g00001 490 ProSitePatterns Actins and actin-related proteins signature. 218 230 IPR020902 -
Mupr5361g00001 490 FunFam Major actin 373 452 - -
Mupr5361g00001 490 PANTHER ACTIN 121 482 IPR004000 -
Mupr5361g00001 490 SUPERFAMILY Actin-like ATPase domain 118 267 IPR043129 -
Mupr5361g00001 490 ProSitePatterns Actins signature 2. 470 478 IPR004001 -
Mupr5361g00001 490 PRINTS Actin signature 229 242 IPR004000 -
Mupr5361g00001 490 PRINTS Actin signature 350 366 IPR004000 -
Mupr5361g00001 490 PRINTS Actin signature 254 273 IPR004000 -
Mupr5361g00001 490 PRINTS Actin signature 175 197 IPR004000 -
Mupr5361g00001 490 PRINTS Actin signature 140 149 IPR004000 -
Mupr5361g00001 490 PRINTS Actin signature 163 174 IPR004000 -
Mupr5361g00001 490 Gene3D - 252 452 - -
Mupr5361g00001 490 CDD NBD_sugar-kinase_HSP70_actin 122 295 - -
Mupr5361g00001 490 SMART actin_3 119 489 IPR004000 -
Mupr5361g00001 490 FunFam Actin, alpha skeletal muscle 115 274 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr5361g00001 Mupr-Chr5361 13490 16973 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr5361g00001 113 487 Cytoskeleton Gene Families AT5G09810 96.000 0.0 753
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr5361g00001 K10355 - gmx:100778206 738.028