Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr5357g00002 ATGAGAAGGCAAGATAAGGAAATAGAGATACCAACCACTTTAGGTTACAACCTTCCCAACCGAGACTCTTCTTCTTCTTCTTCCAAGCTCTCTTCTCCAACTGTTGGTGAAAGAAGTAGTAGTGATCATGATCATGATCATCATGATCATCACGATCACGATCACGATCATGATCAAGATCAACCACCCCATCAAACTCACACATTAATCTTCAACGAACCACCTCACCATAGTCTCTATCCACCACCACCAGCACCACCTCCTCCTATTGCACCCCGTCAACCACATAGACCTATATCAGATCCAGATCTAAGTACCCCAACTGCTCCCACATCGAACCCCCCAAGAACAGCACCGCCTCAAACAGCAGCAACAACCTCGGCACCATCGATCAGGTACCGAGAATGTCTGAGGAACCACGCAGCAAGCATGGGGAGCCACGTGGTGGATGGCTGTGGAGAGTTCATGGCAAGTGGTGAAGAAGGCACCCCAGGATCACTAAGATGCGCGGCGTGTGAGTGCCACCGCAACTTCCATAGAAAGGAGGTTGAAGGAGAACAATCACAACAACAAGCACAACTACAAGCTCCACCACAAGCCCAACATGTTCACAATTACCACAGCTACTACCCCAACAAGCACAACGGTCACCTTCACTTCCCTACACCCTCTTCATCCCTCCATCACAGATTGGTTGCCACCACCACTCCACCAAGTTTGGTTCCCCCAGTGATGATGGCCTTTGGAGGCCCAGCTGAGTCCTCAAGTGAAGATCTCAACATGTTTCAGTCCAACACTGGAGCACAGTTGTCAGTGCAGGCACCATCACTTTCTTCCAAGAAGAGGTTCAGGACTAAGTTCTCTCAGCAGCAGAAAGATAGGATGATGGAATTTGCCGACAAGATTAGTTGGAAGATCCAGAAACATAATGAGCAGGAGGTACAGCACTTTTGTTCTCAAGTGGGTGTCAAGAGACAGGTTTTCAAGGTTTGGATGCATAACAACAAGCAAACAATTTCTCACCTATTTCTCTCTTTTGGTATGGGGCAAGACTCTAGAGAGAGAAAGAAGGGAAAAGAAGAAAAGGAGAAAGATGAGGATGACTTTTAG 1110 0.4757 MRRQDKEIEIPTTLGYNLPNRDSSSSSSKLSSPTVGERSSSDHDHDHHDHHDHDHDHDQDQPPHQTHTLIFNEPPHHSLYPPPPAPPPPIAPRQPHRPISDPDLSTPTAPTSNPPRTAPPQTAATTSAPSIRYRECLRNHAASMGSHVVDGCGEFMASGEEGTPGSLRCAACECHRNFHRKEVEGEQSQQQAQLQAPPQAQHVHNYHSYYPNKHNGHLHFPTPSSSLHHRLVATTTPPSLVPPVMMAFGGPAESSSEDLNMFQSNTGAQLSVQAPSLSSKKRFRTKFSQQQKDRMMEFADKISWKIQKHNEQEVQHFCSQVGVKRQVFKVWMHNNKQTISHLFLSFGMGQDSRERKKGKEEKEKDEDDF 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr5357g00002 369 FunFam Zinc-finger homeodomain protein 2 268 341 - -
Mupr5357g00002 369 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 2 115 338 - -
Mupr5357g00002 369 MobiDBLite consensus disorder prediction 1 130 - -
Mupr5357g00002 369 Gene3D - 266 341 - -
Mupr5357g00002 369 ProSiteProfiles Zinc-finger ZF-HD dimerization-type profile. 133 182 IPR006456 -
Mupr5357g00002 369 MobiDBLite consensus disorder prediction 76 96 - -
Mupr5357g00002 369 NCBIfam ZF-HD homeobox protein Cys/His-rich dimerization domain 132 183 IPR006456 -
Mupr5357g00002 369 Pfam ZF-HD protein dimerisation region 131 183 IPR006456 -
Mupr5357g00002 369 NCBIfam homeobox domain, ZF-HD class 280 337 IPR006455 -
Mupr5357g00002 369 SUPERFAMILY Homeodomain-like 273 338 IPR009057 -
Mupr5357g00002 369 MobiDBLite consensus disorder prediction 350 369 - -
Mupr5357g00002 369 MobiDBLite consensus disorder prediction 16 37 - -
Mupr5357g00002 369 MobiDBLite consensus disorder prediction 38 63 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr5357g00002 Mupr-Chr5357 15552 17032 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr5357g00002 76 338 ZF-HD Transcription Factor Family AT2G18350 46.886 2.66e-63 201
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF zf-HD Mupr5357g00002 ZF-HD_dimer 5.9e-30 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr5357g00002 - - gmx:100776691 449.129